Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_I01668
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Entry
RBI_I01668 CDS
T03158
Name
(GenBank) SpoIID/LytB domain-containing protein
KO
K06381
stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:
4.2.2.29
]
Organism
rus
Ruminococcus bicirculans (ex Wegman et al. 2014)
Brite
KEGG Orthology (KO) [BR:
rus00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rus01011
]
RBI_I01668
Enzymes [BR:
rus01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
RBI_I01668
Peptidoglycan biosynthesis and degradation proteins [BR:
rus01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
RBI_I01668
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Gene cluster
GFIT
Motif
Pfam:
SpoIID
Motif
Other DBs
NCBI-ProteinID:
CCO05370
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All DBs
Position
I:complement(1826670..1828109)
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AA seq
479 aa
AA seq
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MTMNLMTKKICANVCAAVMSITAVGICGELLLDNKSVGAEKAPAVQVKNVEAQSVKTTAA
TEVYDFVKFKKSSVDKYDMSYVQQKKQAKTTKKKASASEFTVEMPEDKGEYYDIKNDPAN
FTDTRSVADEYYTVNDIISGNIVTLNGHELLCQIVNSEIGGEWGEEAIKAQAVAAYTWVR
FNDSIGAIPTVGLKSGYSSKIERCVNAVEGQTVMYNGNIINAVYSASTAGYSTTSEDIWG
VSYPYLKRVKSEFDNKDPNWGIEATYTKDEVKERIESQTDIKLSDDVKNWFKIDSAFSGK
YISGVTIDGHTSCTYDGSEARITGIMLCNLFDVKSNAMEISYKDGVFTFKSYGWGHGVGM
SQWGACYYAEAGYTYDQILTHYYVNCYLGLSAVNDKAVKRGQMSQDEIDKEIKDSEIVDE
GGNASGDSKEDSEPAQTQPTENGTVTTAPAIEAPDTTTTSFDVQPEDNITIEQNTEEIL
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
ttgacgatgaatttgatgacaaaaaagatatgtgcaaatgtctgcgcagcagtaatgagc
ataactgccgttggtatatgcggtgagctgctgctggataataaaagcgtgggcgcagaa
aaagcccctgcggtgcaggtcaaaaacgttgaagctcaaagcgttaagaccactgccgct
actgaggtctatgactttgtgaagttcaaaaagtcctctgtggataagtatgatatgtct
tatgttcagcagaaaaagcaggcaaagaccacaaagaaaaaggcttcagccagtgagttt
actgtggaaatgcctgaggataagggcgagtattacgatataaagaacgaccctgctaac
tttacagatacaagaagcgtcgctgatgagtattatactgtcaacgatataatctcagga
aatatcgtcactcttaatggtcatgaactgctctgtcagatagtcaacagcgagataggc
ggtgagtggggcgaggaagccataaaggcgcaggccgtggcggcttatacatgggtcaga
tttaacgattctatcggtgctatacctacggtggggcttaaaagcggatattcttcaaag
atagaaagatgtgtaaatgccgttgagggtcagaccgttatgtataacggcaatatcata
aatgcagtttattctgcttcaacagcaggttattctaccaccagtgaggatatatggggc
gtttcttacccgtatctcaagcgtgtaaagagcgagtttgacaataaagatcctaactgg
ggcattgaagctacatatacaaaagacgaggtcaaggagcgtatcgagagccaaactgat
ataaagctttccgacgacgtgaagaactggtttaaaatagactctgctttcagcggaaag
tatataagcggagtgactatcgacggtcatacgagctgtacctatgatggcagtgaagcc
aggataacaggtatcatgctctgcaacctctttgatgtgaaatcgaacgccatggagata
agctataaggacggtgtgttcactttcaagtcctatggctggggtcacggcgttggaatg
tcgcagtggggcgcttgctattatgccgaggctggctatacatacgatcagatacttact
cactattatgtgaattgctatcttggtctgtcggctgtaaatgacaaagctgtaaagaga
ggtcagatgtcgcaggacgagatagataaggagataaaggattcagagatagttgacgag
ggcggaaacgcttcaggcgacagcaaagaggacagtgagcctgcacagactcagccgacc
gagaacggcactgttaccaccgctcctgctatagaagcacctgatactacaacaacttcg
tttgacgttcagcctgaggataatatcaccatagagcaaaatacagaagaaatattataa
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