KEGG   Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_I01713
Entry
RBI_I01713        CDS       T03158                                 
Name
(GenBank) Protein virD4
Organism
rus  Ruminococcus bicirculans (ex Wegman et al. 2014)
Pathway
rus03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rus00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    RBI_I01713
SSDB
Motif
Pfam: T4SS-DNA_transf TraG-D_C TrwB_AAD_bind ISG65-75
Other DBs
NCBI-ProteinID: CCO05415
LinkDB
Position
I:1881422..1883926
AA seq 834 aa
MDLEKLKHIKNLIIAKILFVFGWIYDFAMRILNAVNKTPIEKDKDRRNVRIKQFAIATSI
LYVIFNSIFIYVIKSLRSISTVNGSADYSKTHFMPWNIIVPPGFMMFIFELILSLIVGLG
ITVKLHTLYRMKNDSKNVKGDNKFMEDNELLDHFLAVPMDNITSAEKAGMLIGESNGVYY
IEPGTYNTMTVGAPRSGKGECYVLPSLRLMANAKEKPSVIVNDMKGELLELTYKEFARNG
YKIVTLNLIDTDRSDCWNPLQLIIDEYLTAKHGNNDLSQTSKLVSSFAHCLTDDTQSEAI
WTDSARSLLSALIYYFLDKGYEKNDMSCVNMFSITTFFTEFGIYNTVIEDESGNKKEVNA
LDELFNALPVGCLARTSYSTSKFSQGDTRSSIYTVLSADLEIFMTDMGVQKLTSKNEINF
ADLINEDQPCIIYMLVPYEEKSRYVIASMFADQSFLYLAKQARKYPDGKLPRKIEYMYDE
FGQMTKLPDLSSKMNASPGANILFNLFLQDYGQLKKYEKEEDGIKGGCNIQIYILSLNGN
TNKAFSEMIGNETVNYLTFSGSLYGFLDHQGERVDSKALLDTTQLSKLPFGTAIVKKMRC
EPIKTNITPYHLLTNKMPRIPIDELPIKSRNIDLSAAMYPYDELWDSLGVIGYQYRLDSL
KKTAERAMNDYYMQLGKIDQIKSDGSTVSESMYKAALELEKNAGAAQRQVIEYQQQVQKL
NEFRANEARKIFAEAYGTSGSDEEDDYTDQDELYFPGEYPDDGPYVDITALLYKINGLVG
SELGGFLSDQNYAAARGYIKKIQKRPDIRSNFVADEWAALEQYINNEELKNANT
NT seq 2505 nt   +upstreamnt  +downstreamnt
atggatcttgaaaaacttaagcacataaaaaatcttatcatcgcaaaaattctttttgta
tttggctggatctatgattttgctatgcgtattttaaatgcggtgaataaaacacctatt
gaaaaagacaaagaccgccgaaatgtcagaataaaacaatttgcaatagctacatcgata
ctatatgtgatctttaacagcattttcatctatgttataaagtcattgagaagtataagc
accgtcaatggcagtgcagattattcaaaaacgcactttatgccgtggaatatcattgtt
ccacccggatttatgatgttcatttttgagttgattctttctcttatagttggtctggga
ataacggtaaagctgcatacactctaccgaatgaaaaatgacagcaagaacgttaagggt
gacaacaagtttatggaggacaacgaactgttagatcattttctggcagtgcctatggat
aacatcacttcagccgaaaaggcaggaatgctcataggagaaagcaacggcgtctactac
atcgaaccgggcacatacaacacaatgaccgtaggtgcaccacgttccggcaagggtgaa
tgctatgtgctgccaagcctgaggcttatggcgaatgcaaaagaaaagccctctgttatc
gttaatgatatgaaaggcgagctgcttgaactgacctataaggaatttgccagaaacggc
tacaagatagttactcttaaccttatcgatactgaccgttcggactgttggaaccctctt
cagcttattattgacgagtacctcacagctaaacacggcaacaatgacttgtcgcagact
tcaaagctcgtcagctcattcgctcactgccttacagacgatacccagagcgaggctata
tggacagactccgcaaggtcgctgctcagtgccctcatatactatttcttagataaaggc
tatgagaaaaatgatatgtcctgcgttaatatgttcagtatcacaacattctttactgaa
tttggaatttacaatactgttatcgaggacgaaagcggtaacaaaaaagaagtcaacgca
cttgatgaactgttcaatgcgctgcctgtgggctgtcttgcaagaacatcctattcaacg
tcaaagttctcccagggtgatacacgttcttcaatatacactgttctctccgcagacctt
gagatattcatgacggatatgggtgttcaaaagctgacatctaaaaatgaaataaacttt
gctgaccttatcaatgaagatcagccttgcataatatatatgctcgttccatatgaggaa
aaatcacgatacgttatcgcctcgatgttcgcagatcagtcatttttgtacctcgcaaaa
caggcaagaaagtatccggacggaaagctgccaaggaaaatagagtatatgtatgacgag
ttcggacaaatgactaagctgcctgatctcagcagtaaaatgaatgcctcacccggtgct
aacattcttttcaatctatttcttcaggactacggacagcttaagaaatatgaaaaagaa
gaagatggcataaaaggcggctgtaacattcagatatacatattatctcttaatggtaat
acaaacaaagcgttttctgaaatgataggaaatgaaacagtaaactatttgaccttcagc
ggaagcctgtatggatttttagatcaccaaggtgaacgagttgacagcaaggcgctgctc
gatacaacacagctctcaaagctgccgttcggcactgctattgtcaaaaaaatgcgatgt
gaaccaataaagaccaatattacaccatatcatctgctaactaacaaaatgccacgcata
cctatagacgaactgccgataaaatcacgcaacattgacctttccgcagcaatgtatcca
tatgacgagctttgggacagtctgggcgtaataggttatcaatacagattagacagcctc
aaaaagactgctgaacgtgctatgaatgactactatatgcagctaggcaagatagaccaa
ataaagtcagacggcagcactgtgtccgaaagtatgtataaggctgcacttgaacttgag
aaaaatgccggtgcggctcaacggcaagtcatagaatatcagcaacaggtacaaaagctc
aatgagtttcgtgcaaacgaggcacgaaagatctttgcagaggcatatggaacaagcggc
tcagacgaagaagatgattacaccgatcaggacgagctctatttcccaggagaatacccg
gacgatggtccgtatgtcgatatcaccgccctgctatataagatcaacggacttgtaggc
agcgagcttggaggatttctttcagatcagaactatgccgctgcaaggggctacataaag
aaaatacagaaacgtcctgatatacgcagcaattttgttgccgatgaatgggcggcactg
gaacaatacattaataatgaggaattgaaaaatgcgaatacctaa

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