Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_I01720
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Entry
RBI_I01720 CDS
T03158
Symbol
nrdD
Name
(GenBank) anaerobic ribonucleoside-triphosphate reductase
KO
K21636
ribonucleoside-triphosphate reductase (formate) [EC:
1.1.98.6
]
Organism
rus
Ruminococcus bicirculans (ex Wegman et al. 2014)
Pathway
rus00230
Purine metabolism
rus00240
Pyrimidine metabolism
rus01100
Metabolic pathways
rus01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
rus00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
RBI_I01720 (nrdD)
00240 Pyrimidine metabolism
RBI_I01720 (nrdD)
Enzymes [BR:
rus01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.98 With other, known, physiological acceptors
1.1.98.6 ribonucleoside-triphosphate reductase (formate)
RBI_I01720 (nrdD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
NRDD
ATP-cone
Gly_radical
Zn_ribbon_Nudix
Cas12f1-like_TNB
DUF5817
Zn_ribbon_TFIIB
Zn_Ribbon_Prim
Motif
Other DBs
NCBI-ProteinID:
CCO05421
UniProt:
A0AAP3VPV5
LinkDB
All DBs
Position
I:1888224..1890398
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AA seq
724 aa
AA seq
DB search
MKIIKRSGAENTFDKEKIENAVAKANITVEEKDRLSEGEIGEIAQNIEDKCSEMNRAMDV
ETIQDWVEADIMRHGKYTVAKHYITYRYERSIVRQANTTDKQILSLLNFENEEVKQENSN
KNPTVNSVQRDYMAGEVSKDITRRFLLPDDIVEAHEKGLIHFHDADYFAQHMHNCCLVNL
EDMLQNGTVISEVMIEKPHSFSTACNIATQSIAQIASSQYGGQSITLSHLAPFVQISRDK
YRREVKKEFAELNIPADEDTINKVAEMRVKAEIVQGVQMIQYQVITLMTTNGQAPFVTVF
MYLDEVPEGQTRDDLAAIIEEMLRQRIQGVKNEKGVYITPAFPKLIYVLEEDNIREGSKY
WELTKLAAKCTAKRMVPDYISEKKMKELKVDKNGNGQCYPCMGCRSFLTTYLDENGKPKY
YGRFNQGVVTINLVDVACSSYKDMDKFWKIFDERLELCRRALMLRHERLKGTPSDVAPIL
WQNGALARLKKGETIDKLLFGGYSTISLGYAGLCECVRYMTGKSHTDPSATPFALEVMQH
LNDACAKWRAETNIDFSLYGTPLESTTYKFARCLQKRFGVIEGVTDRNYITNSYHIHVTE
NIDAFDKLTFESQFQALSPGGAISYVEVPNMQNNIEAVLAVMQHIYDNIMYAELNTKSDY
CQKCGFDGEIKIVEDDGKLVWECPNCGNRDQNTLNVARRTCGYIGTQFWNQGRTQEIKER
VLHL
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
gtgaagataataaaaagaagcggcgctgagaatacgttcgataaggaaaagatagaaaat
gccgttgcgaaagctaatatcactgtggaggaaaaggataggctctctgagggagaaata
ggagagatagcacagaatatagaggacaaatgctctgaaatgaatagggctatggacgtt
gaaactattcaggactgggtggaagccgatatcatgcgccacggcaagtatacagtggca
aagcattatatcacataccgctatgagcgttctatcgtcagacaggctaatactactgac
aagcagatactttctcttcttaacttcgagaacgaggaagtcaagcaggaaaattccaat
aagaaccctactgtcaattcagttcagagggattatatggcaggtgaagtgagcaaggat
atcacaagaagatttttgcttcctgacgatatagttgaagcccacgaaaaaggtctgata
catttccacgacgccgattatttcgctcagcatatgcacaactgctgtcttgtaaatctt
gaggatatgctccagaacggcactgtcataagcgaggtcatgatagaaaagccacacagc
ttctctacagcctgcaatatcgctacacaatctatcgctcagatagcttcttcacagtat
ggcggacagagtatcacactttcccaccttgctccgttcgttcagatatcccgtgataaa
taccgccgtgaggtaaaaaaggagttcgcagagcttaatatccctgccgacgaggatact
ataaataaggtagccgaaatgagagtaaaggctgagatagttcagggcgttcagatgata
cagtatcaggtcatcactcttatgacaacaaatggtcaagcacctttcgttactgttttc
atgtaccttgacgaagtccctgaggggcagacaagagatgaccttgcggctatcatagag
gaaatgctcagacagcgtatccaaggcgtaaagaacgaaaagggcgtttatatcacccct
gcgttccctaagctaatatatgtccttgaagaggacaacataagagaaggctcaaaatat
tgggagcttacaaagcttgctgcaaagtgtaccgcaaagagaatggttcctgactatata
agtgaaaagaaaatgaaggagcttaaggtagacaagaacggcaatggtcagtgctaccct
tgcatgggctgcagaagcttccttacaacatatcttgacgaaaacggcaagcctaaatat
tacggcagattcaatcagggcgttgttacaataaaccttgtggacgttgcctgctcgtca
tataaggatatggataagttctggaagatatttgatgaaagacttgagctttgcagacgt
gcgcttatgctccgtcacgaaagacttaaaggcactccgtcagacgttgcgcctattctt
tggcagaacggtgcattggcaaggcttaaaaagggcgaaactatcgacaagctcctgttc
ggcggatattccaccatatcacttggctatgcaggtctttgcgaatgcgtaagatacatg
acgggcaagtcacacacagacccttcagcaactccttttgcacttgaagttatgcagcac
cttaatgacgcctgcgcaaagtggagagcagaaacaaacatagatttcagcctttacggc
acgccattggagtccacaacatacaaatttgcaagatgtttgcagaagcgtttcggtgtt
atcgagggtgtaacagacagaaactacatcacaaacagctatcatatccatgttaccgag
aacatcgacgcatttgacaagctcacctttgagtcacagttccaggctctctcaccagga
ggagctatcagctatgtggaagtgccgaatatgcagaacaacatagaggcggtccttgca
gttatgcagcatatttacgacaacatcatgtatgcagagcttaacacaaagagcgactac
tgtcagaagtgcggttttgacggtgagataaagatagtagaagatgacggcaagcttgta
tgggagtgtccgaactgcggcaacagagatcagaacactctgaacgttgcaaggcgcacc
tgtggctacatcggcacgcagttctggaatcagggcaggactcaagagataaaggagaga
gttttgcatttgtga
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