Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_I01906
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Entry
RBI_I01906 CDS
T03158
Name
(GenBank) Carbohydrate-Binding Module Family 35 protein / Glycoside Hydrolase Family 26 protein
KO
K01218
mannan endo-1,4-beta-mannosidase [EC:
3.2.1.78
]
Organism
rus
Ruminococcus bicirculans (ex Wegman et al. 2014)
Pathway
rus00051
Fructose and mannose metabolism
rus01100
Metabolic pathways
rus02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rus00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
RBI_I01906
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RBI_I01906
Enzymes [BR:
rus01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.78 mannan endo-1,4-beta-mannosidase
RBI_I01906
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_26
CBM_35
Pgp3_helical
Motif
Other DBs
NCBI-ProteinID:
CCO05604
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Position
I:2085065..2086777
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AA seq
570 aa
AA seq
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MRHYRIMAAAVAAICTLSGCGVQIGRNESMTAPEKTSVVTTTKKQTNDDSKADEQALKSY
EETKIVANAIPYVKFSKSVEAETGSVSGKAKVKSDRKGYKGKGYVTNISAEEDWSREIEL
TDSQYYNLTITVASDVPCVNGIAVNGKKLQDFSASGSGKFEKVTFKNIYIEKGKTAISVI
PVDGGLDVDCLTLTASEDISKLDLTISKPALSNKDSDYNAKALYQYLCESYGKQVLLGQH
DTIGTSAETDMIYKTTGKYPAIRFGDLMLATEKDSITTDTEMNIAMDWASKDGIVGYMWH
WAAPDDKREYYADQTDFDIKKAVTKENIAELSLEDIKKLQKDGKVSKECVAVVQDIDTVS
EKLSTLRDEGIAVLWRPLHEASNGDFWWGNDKEAYKWLWKLMYERQTKYHKLNNLIWVWS
AQNADWYVGDEYCDVLSCDVYDDGNKDAQVNIMLFLQSISKNKPIAMSECGSFPDIQSIA
DEKAMWAFIGQWGGNYLMTDDGKLAEENNTAAELIKTYNNNLTLTRDKLPDFTHLASSIK
DTEEKSAESKKNDSSKADSKTKKENTSKAE
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgagacattatcggataatggcagcggctgttgcagcaatttgcacgctgtcaggctgc
ggagtgcagataggcagaaacgagagcatgaccgcccccgaaaaaacatctgttgtaacc
acaacaaagaaacagacaaacgatgacagcaaggctgacgagcaggctttaaaaagctat
gaagaaacaaagatagtggcaaacgccataccttatgtgaagttttcaaaaagcgttgaa
gccgaaacaggctcagtttcaggcaaggcgaaagtaaaaagcgaccgcaagggctacaag
ggcaagggttatgtgacgaacatttccgctgaggaagattggtcaagagagatcgagctt
accgactcacagtattataaccttaccataacagtggcttccgatgtgccgtgcgtgaac
ggcatagctgtgaacggcaaaaagcttcaggatttctcagccagcggctcgggcaagttt
gaaaaggtgactttcaagaacatctacatagaaaaaggcaagacggcaatatccgttatc
cctgtggacggcggacttgacgttgactgcctgaccctcaccgcaagcgaggatatatca
aaacttgaccttactatatcaaagcctgctctttcaaacaaagactccgactacaacgca
aaagcgctttatcagtatctttgcgaaagctacggcaagcaggtgcttttgggtcagcat
gacaccatcggcacatctgctgaaacagacatgatatacaaaaccacaggaaaataccct
gcaatacgttttggcgaccttatgcttgccactgaaaaggacagcatcaccaccgacacc
gagatgaacatcgccatggattgggcttcaaaggacggcatagtgggctatatgtggcac
tgggctgcccctgacgacaagcgtgaatattatgccgaccagacggattttgacatcaaa
aaggcagttacaaaggaaaatatcgcagaactcagccttgaggatatcaaaaagcttcaa
aaggacggcaaggtaagcaaagaatgtgttgctgtcgttcaggatatcgacaccgtatct
gagaaactctccaccctccgtgatgagggaatagcagtgctttggcgaccgctccacgag
gccagcaacggcgatttctggtggggcaatgacaaggaagcctacaaatggctttggaag
cttatgtacgagcgtcagacgaaataccacaagctgaacaatctcatatgggtatggtca
gcacagaatgccgattggtatgtgggcgacgaatactgcgacgtgctttcctgcgatgtt
tatgacgacggcaataaggacgcacaggtgaacataatgcttttcctgcaaagcatatca
aagaacaagcctattgcaatgagcgaatgtggaagcttccctgacatacagagcattgca
gacgaaaaagccatgtgggcgttcataggtcaatggggcggaaattatcttatgaccgat
gacggcaagcttgctgaagaaaacaacaccgccgccgagcttatcaagacgtataacaac
aatctcactctaacaagggataagctccccgacttcacccaccttgcaagttccataaag
gacacggaagaaaaatccgctgagagcaaaaagaatgatagctcaaaggctgacagcaag
acgaagaaagaaaatacttctaaagcagaatag
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