Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_I01915
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Entry
RBI_I01915 CDS
T03158
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rus
Ruminococcus bicirculans (ex Wegman et al. 2014)
Pathway
rus03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rus00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RBI_I01915 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rus03021
]
RBI_I01915 (rpoA)
03400 DNA repair and recombination proteins [BR:
rus03400
]
RBI_I01915 (rpoA)
Enzymes [BR:
rus01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RBI_I01915 (rpoA)
Transcription machinery [BR:
rus03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RBI_I01915 (rpoA)
DNA repair and recombination proteins [BR:
rus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RBI_I01915 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
RAD51D_N
Hpr_kinase_C
Motif
Other DBs
NCBI-ProteinID:
CCO05613
UniProt:
A0AAP3QK59
LinkDB
All DBs
Position
I:complement(2091078..2092037)
Genome browser
AA seq
319 aa
AA seq
DB search
MLEKIEKPEIETAELKSNGTYGKFILEPLERGYGITLGNSLRRVLLSSLPGVAVTSVKID
GVHHELSTIPGVKEDVTEIILNLKGLTAKLYGEGPKTIYIEAEGECVVTAGDIKTDSEVD
ILVPDMHIATLGPGAKLYMEIVIDRGRGYVSAEKNKALMPNAPIGVIAVDSIYTPVLKVN
FTVDNTRVGQITDFDKLTLEVWTDGTISAKEAVSMAAKLLNEHLNLFVDLSEETNVVEMM
VEKDEKGKEKILEMTIEELDLSVRSFNCLKRAGINTVNDLIEKSAEEMMKVRNLGKKSFD
EVKEKLHSLGYDLNSEDDN
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaaaaaatagaaaagcctgaaatcgaaacagccgagctaaagagcaacggaaca
tacggcaagtttattctcgagcctctggagcgtggctatggtattacgctcggaaatagt
ctgagacgtgtactgctctcctctttgccaggcgtcgccgttacatcggtaaagatcgac
ggtgtacaccacgaactatcaacaattcccggagttaaggaagatgttactgagatcatt
cttaacctcaagggtttaactgcaaagctttacggcgagggtcctaagactatctacatt
gaggccgagggcgagtgcgttgtcactgccggcgacatcaagacagattctgaggtggac
attcttgttcctgatatgcacattgcaactttgggaccgggcgcaaagctttatatggaa
attgtcatcgacagaggtcgtggatatgtttctgcggaaaagaacaaggcgcttatgcct
aacgcccctattggtgttattgcagtagacagtatttatacgcctgtattaaaggtgaac
ttcacggttgacaacacccgtgttggacagatcaccgattttgataagctgacattggag
gtttggaccgacggtactatctccgctaaggaagctgtatcaatggcagccaaactcctc
aacgagcatctgaatctctttgttgatctctcagaagagactaacgttgtagagatgatg
gttgaaaaggatgaaaagggcaaggaaaagatccttgagatgaccattgaggaacttgac
ttatctgtgcgttcatttaactgtctgaagcgtgcaggaattaacacggttaacgatttg
attgaaaagtctgctgaagaaatgatgaaggtaagaaaccttggtaagaagtcattcgac
gaggtcaaggaaaagcttcattcattgggttacgaccttaattcagaggacgataattaa
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