Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_II00052
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Entry
RBI_II00052 CDS
T03158
Symbol
miaB
Name
(GenBank) tRNA-i(6)A37 thiotransferase enzyme MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
rus
Ruminococcus bicirculans (ex Wegman et al. 2014)
Brite
KEGG Orthology (KO) [BR:
rus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rus03016
]
RBI_II00052 (miaB)
Enzymes [BR:
rus01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
RBI_II00052 (miaB)
Transfer RNA biogenesis [BR:
rus03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
RBI_II00052 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
CCO05826
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All DBs
Position
II:55075..56475
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AA seq
466 aa
AA seq
DB search
MTENFSEIINEETASQKLLQWSGEYERTCGHKPLALIHSYGCQQNVSDGEKIKGMLSKVG
YEFTSDVNEAQLILYNTCAVRENAEDKVFGKLGDLKHLKENNPELIIGICGCMAQQKHVA
EKIKKTYRQVDLVFGTFAYNDMYNMLWEIISKHDRIFNLSENHVDINEDFLQLRDDKIRA
FVPIMYGCNNFCTYCIVPYVRGRERSRKPESVIAEVRALVKNGYKEITLLGQNVNSYSYG
FPELLRELDKIEGDFRIRFMSSHPKDASHELIDAILECKKVCKHLHLPVQAGSDRILKLM
NRRYTTADYLKIIDYARSKDPEFSFTTDLIVGFPSETYEEFCETKELIKKVKYDNIYSFV
YSRRSGTKAAEMEDHISDKQKGLWLRELLLEQREVSTAWLSRFVGRTVTVLPTGEGRTGA
DYLTGKSDEDMIVEVKADKKYIGKFIQVRITKAMNWALRGELVEDK
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgactgagaatttttcggaaataataaatgaggaaaccgcttcgcagaagctgctccaa
tggtctggtgaatacgaaagaacttgcggtcacaagccgcttgcccttatccattcatac
ggctgtcagcaaaacgtcagcgacggtgagaaaataaaaggtatgctctcaaaggtgggc
tatgagttcacgtccgacgtgaacgaggctcagcttatattgtataacacctgtgcggta
agagaaaatgccgaggacaaggtgttcggcaaacttggcgaccttaaacatctcaaagaa
aacaatcccgagcttattataggtatctgcggctgtatggctcagcagaagcacgttgcc
gagaagataaaaaagacctatcgtcaggtggacttggtgttcggaacatttgcctataac
gatatgtataatatgctatgggagataatatcaaagcatgacaggattttcaatctgtca
gaaaatcatgttgacataaacgaggatttcttgcaacttcgtgacgataagataagagcg
ttcgtgcctatcatgtatggctgcaacaatttctgcacctattgcatagtgccttacgtc
aggggcagagagcgcagcagaaagcctgagtccgttatcgcagaggtaagagcacttgtg
aaaaacggctataaggaaataaccctgcttggtcagaacgttaattcatacagttatggt
tttcctgagcttttgagagagcttgacaagatagagggcgatttccgcataagatttatg
tcaagccacccaaaggacgcaagccatgagcttattgacgctatacttgaatgcaaaaag
gtgtgcaagcatttgcatcttcctgtgcaggcaggctcagacaggatactaaagcttatg
aatcgccgctataccacggcggattatctgaaaataatcgactatgccagaagcaaagac
cctgagttttcattcacaacagaccttatcgttggctttccaagtgaaacatacgaggag
ttctgcgaaaccaaggagcttatcaaaaaggtaaagtacgataatatctattcttttgtg
tattcaagacgaagcggcacaaaggctgccgaaatggaggatcacatctcagacaagcag
aagggtctgtggctgagagaactgcttttggagcagagagaggtgtcaacagcgtggctt
tctagatttgtgggaagaactgtaaccgtgctgccaacaggcgaaggcagaactggcgct
gattatctcacaggcaagagcgacgaggatatgatcgtcgaggtgaaagcggataaaaaa
tatatcggtaaattcattcaggttcgcataacaaaagcaatgaactgggctttgagaggc
gagcttgttgaagataaataa
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