Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_II00223
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Entry
RBI_II00223 CDS
T03158
Symbol
rumA2
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
rus
Ruminococcus bicirculans (ex Wegman et al. 2014)
Brite
KEGG Orthology (KO) [BR:
rus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rus03009
]
RBI_II00223 (rumA2)
Enzymes [BR:
rus01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
RBI_II00223 (rumA2)
Ribosome biogenesis [BR:
rus03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RBI_II00223 (rumA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Cons_hypoth95
TRM5-TYW2_MTfase
MTS
Methyltransf_25
N6_N4_Mtase
Methyltransf_15
PrmA
UPF0020
TehB
RrnaAD
Methyltransf_4
Methyltransf_11
TPMT
CMAS
Methyltransf_23
Ral
SAM_MT
Ubie_methyltran
MetW
P2
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
CCO05997
LinkDB
All DBs
Position
II:265532..266803
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AA seq
423 aa
AA seq
DB search
MKRVNVMNKHTTIDKSTGEKKCSCFKRCGGCQLDKVYAQQIEWKQAKADRMLSRFCRPQQ
IITMDDPYNYRNKVQTVYKVNSSKRIVSGVYQSSTHSMIITDDCFLEDIRAQQIVATLKE
LMVDFRILPYNEESGQGLLKHTLIRTSQTTGEVMLVLVTATPIFPAKKNFVKAITEKHPY
ITTIVQNVNKGRVPLTLGDRDIIMYGKGYITDEMCGCKFRISPHSFYQVNPEQTEKLYSK
AVSCAELKKGDKVIDAYCGTGTIGLIAAKSGADVAGVELNAEAVKDAVSNAKLNKLDNIR
FYNEDAGEFMTKLAQAGESCDTVFLDPPRAGTTEEFVEALGKLRPEKIVYVSCKIETLER
DLKLLAKIGYKAQLIQPVDMFPHTTGIENVVLLKRKMISLTPNRTPDKKGDKKIEPKGKT
SHR
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagagtaaatgtgatgaataaacataccactatcgataagtcaacaggcgagaaa
aaatgtagctgctttaaacgttgcggcggctgtcagttggataaggtctacgcccagcaa
atagaatggaagcaggcaaaagccgatagaatgttgagccgcttttgcagacctcagcag
ataataactatggacgacccctataattatcgcaataaagtccaaactgtctataaggtc
aatagctcaaagcgtatcgtctcaggagtatatcagtcctctacccatagcatgataata
actgacgattgctttttggaggatataagagcacagcaaatagtcgctacccttaaagag
cttatggttgacttccgtatccttccatataacgaggaaagtggtcagggccttcttaag
catacccttatccgtacctcccaaacaacaggcgaggtaatgctcgtgctagttacagct
acccccatatttcctgcaaagaaaaatttcgttaaagctatcactgaaaaacatccgtat
ataaccactatcgtccaaaacgttaataaaggcagagttcctcttactttgggcgaccgt
gatattataatgtacggcaaaggctatatcaccgacgagatgtgcggctgtaagttcaga
atttcacctcattctttctatcaggtaaaccccgagcagaccgaaaagctctattctaaa
gcagtttcttgtgcagagcttaaaaaaggcgataaagttatcgacgcatattgcggaaca
ggtactatcggtcttatcgctgcaaaaagcggtgcagacgtggcaggcgttgagcttaat
gccgaagccgtaaaggacgcagtttcaaatgccaagctcaataagcttgacaatatcaga
ttttataatgaggacgcaggtgagttcatgacaaagcttgcgcaggcaggggagagttgt
gatacagttttccttgaccctccaagagcaggcacaacagaagaatttgttgaagccttg
ggcaaactcagacctgaaaagatagtctacgtttcctgtaaaatagaaactctcgagcgt
gatttgaagcttcttgcaaaaataggctataaagcacagcttatccagcccgttgatatg
ttcccgcataccacaggtatcgaaaatgtggttcttttaaaaagaaaaatgatatcgctc
acaccaaacagaacacctgataaaaagggggataaaaaaattgaaccaaaaggtaaaact
tctcacagataa
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