Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_II00267
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Entry
RBI_II00267 CDS
T03158
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rus
Ruminococcus bicirculans (ex Wegman et al. 2014)
Brite
KEGG Orthology (KO) [BR:
rus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rus03032
]
RBI_II00267 (gyrA)
03400 DNA repair and recombination proteins [BR:
rus03400
]
RBI_II00267 (gyrA)
Enzymes [BR:
rus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RBI_II00267 (gyrA)
DNA replication proteins [BR:
rus03032
]
Prokaryotic type
DNA Topoisomerases
RBI_II00267 (gyrA)
DNA repair and recombination proteins [BR:
rus03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RBI_II00267 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
FliT
Motif
Other DBs
NCBI-ProteinID:
CCO06041
LinkDB
All DBs
Position
II:318042..320279
Genome browser
AA seq
745 aa
AA seq
DB search
MARKKAEPKKTAKPNNNAYIEGAGLVADEKITMSLEKNYMPYAMSVLVSRAFPEIDGFKP
SHRKLLYTMYKMGLLNGKLTKSANIVGATMRLNPHGDGAIYETMVRLSQGNEALLHPYVM
SKGNFGKAYSRDMAYAASRYTEAKLMPICQELFGDIDKDTVDFVPNYDNTTTEPTLLPAT
YPSILVNANVGIGVSMASSVCPFNLSEVCETTIGLMKNPDFNALETLKGPDFPGGASLLY
DEEELDKIYRTGKGSVKLRAKYQYDKESRCLEIVEIPATTTVEAIIEKIIALVKAGKIRE
VSYIRDETDINGLKIGIDIKKGVDPDKLMQKLYKLTPLQDSYSCNFYILVHGYPRIMGVY
DIIKEWVAFRMDCVRRRTSFDLAKKKDKLHLLKGLGKILLDIDKAIKIIRETEEETEVVP
NLMVGFGIDEIQADYVAEIKLRHLNREYILKRTAETEDLEKAIAELEDILGSDRKIKNII
ISELKEVSKKYGQPRKTQFYYKTDIEEIDIEDDILDYACKLFLSQSGYFKKCTPQSLRMA
SEQKYKEGDGPLQEMESTNKTELLFFSDKAAVYKTKVSQFADTKASSLGDYIPAKLGFDD
GEGVVSMVNTVDYSGYMIFCFENGKVAKVPLNAYETKTNRKKLANAYSAKAKLVGMFFVQ
DNAEIMLRTTNGRAMIFDTALLMPKSTRDTIGVQVMTLKAKNAVVDKAFIVDDETAAGLS
KYRSKTIPVAGCFAKDIEDPDQMHF
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaaaaaaggcagagcctaaaaagactgctaaaccaaataacaacgcatatatc
gagggtgcaggacttgttgcagatgaaaagataacaatgtctcttgaaaagaactatatg
ccatatgccatgagcgttttggtatcaagagcgttccctgagatagacggctttaagccc
tcacacagaaaactgctttataccatgtataaaatgggacttttaaacggaaagctcaca
aagtctgccaatatcgttggtgcgaccatgaggctcaatcctcacggcgacggtgctata
tatgaaaccatggtaagactttcacagggcaatgaagcacttttgcacccatatgtaatg
agtaagggaaacttcggtaaggcatattcaagagatatggcgtatgctgcctctcgatac
actgaggcaaagctcatgcctatctgtcaggagcttttcggagatatagataaggacact
gtggattttgttcctaactatgataacaccaccacagagccgaccttgcttcctgctact
tacccgtcaatacttgttaatgcaaacgttggtataggcgtttctatggcttcatcagtt
tgtccgttcaaccttagcgaggtttgtgagacaactatcggacttatgaaaaatcctgat
ttcaacgctcttgaaacgctgaaaggacctgactttccgggcggtgcttcacttctctat
gatgaggaggagcttgataagatataccgcacaggaaaaggctctgttaagctgagagca
aaatatcagtatgacaaggagtcaaggtgtcttgaaatcgttgagatacctgccactacc
acagttgaagcaataatcgagaagataattgctctcgttaaggcaggcaagataagagag
gtatcatatatccgtgatgaaacggacattaacggtctgaaaataggtatagatatcaaa
aagggcgtagaccctgataagcttatgcaaaagctttataagctgacgccgcttcaggac
tcatattcatgcaatttctatatacttgttcacggctatccaagaataatgggcgtttat
gatataattaaagaatgggtagcgttcagaatggactgcgttcgccgtaggacaagcttt
gaccttgctaaaaagaaagacaagctgcatctgctgaaaggtcttggaaaaatacttctc
gatatcgacaaggctataaagataatcagagaaacggaagaagaaacagaggtcgttcct
aaccttatggttggattcggcattgacgagatacaggcagattatgttgctgaaataaag
ctcagacaccttaaccgtgagtatatcctcaaaagaactgccgaaactgaagatcttgaa
aaagctattgcagagcttgaagatattcttggaagcgacagaaaaataaagaatatcatc
atttccgaattaaaggaagtttcaaagaagtatggtcagccaagaaaaactcagttctat
tataagactgatatcgaggagatagacatagaggacgatattcttgactacgcctgcaag
cttttcctatctcaaagcggttatttcaagaaatgtactccgcaatcactgagaatggca
agcgagcagaagtataaagagggcgacggtccgcttcaggaaatggaaagcaccaacaaa
acggagcttctgttcttctcagacaaggcggctgtgtataagaccaaggtatcgcagttt
gccgacacaaaggcaagctctcttggtgactatattcctgcaaagcttggttttgatgac
ggtgagggcgttgtgtccatggtgaatactgtagattattcgggctatatgatattctgt
tttgaaaacggaaaggtggcaaaagtgccgctcaatgcctatgaaacaaagaccaacaga
aagaagcttgccaacgcttattctgcaaaggctaagcttgtgggaatgttctttgtgcag
gataacgctgagataatgcttcgcacaactaacggcagagcaatgatatttgatacagcg
cttcttatgcctaagtccacgagagatactataggcgttcaggtcatgacacttaaagcg
aagaatgcagttgttgataaggcgtttatcgttgacgatgagacagcagcaggcctttca
aaatatcgcagcaaaacgatacctgttgcaggctgttttgcaaaggatatcgaagaccct
gaccagatgcacttctga
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