Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_II00344
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Entry
RBI_II00344 CDS
T03158
Name
(GenBank) Transcription elongation factor, GntR family
KO
K07979
GntR family transcriptional regulator
Organism
rus
Ruminococcus bicirculans (ex Wegman et al. 2014)
Brite
KEGG Orthology (KO) [BR:
rus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rus03000
]
RBI_II00344
Transcription factors [BR:
rus03000
]
Prokaryotic type
Helix-turn-helix
GntR family
RBI_II00344
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Gene cluster
GFIT
Motif
Pfam:
GntR
Rrf2
HTH_36
HTH_24
HTH_Crp_2
Fe_dep_repress
MarR
Put_DNA-bind_N
GD_AH_second
HTH_50
LexA_DNA_bind
HTH_11
HTH_29
Motif
Other DBs
NCBI-ProteinID:
CCO06105
LinkDB
All DBs
Position
II:complement(397940..398317)
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AA seq
125 aa
AA seq
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MITLDLTGRAPIYEQICSQFSSLISKGVLKENDKLPSSRMLAKELGLNPNTVAKAYSRLE
HDDIIYSVAGKGCFVAKQKGSIEKKLLEEFKLHAAAAMQAGISLGSLTFVLEELAEEQRE
RSDKE
NT seq
378 nt
NT seq
+upstream
nt +downstream
nt
gtgataacgcttgatcttacaggaagagcacctatctacgaacagatatgcagccagttc
tcaagccttatatcaaaaggcgtgctgaaagaaaacgataagctgccaagctcaagaatg
ttggcaaaggaactgggtctgaatccaaacacagtcgccaaagcctacagcagacttgag
catgacgatataatctattctgtagcaggaaaaggctgctttgtggcaaagcaaaaaggc
tctatagagaaaaaattgctggaagaatttaagctccatgccgccgccgcaatgcaggca
ggcataagccttggatcgcttaccttcgtccttgaagaactggcggaggaacagagagaa
aggagtgacaaagaatga
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