Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_II00345
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Entry
RBI_II00345 CDS
T03158
Name
(GenBank) hypothetical protein
KO
K01666
4-hydroxy 2-oxovalerate aldolase [EC:
4.1.3.39
]
Organism
rus
Ruminococcus bicirculans (ex Wegman et al. 2014)
Pathway
rus00360
Phenylalanine metabolism
rus00362
Benzoate degradation
rus01100
Metabolic pathways
rus01120
Microbial metabolism in diverse environments
rus01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
rus00001
]
09100 Metabolism
09105 Amino acid metabolism
00360 Phenylalanine metabolism
RBI_II00345
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RBI_II00345
00622 Xylene degradation
RBI_II00345
00621 Dioxin degradation
RBI_II00345
Enzymes [BR:
rus01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.39 4-hydroxy-2-oxovalerate aldolase
RBI_II00345
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Gene cluster
GFIT
Motif
Pfam:
HMGL-like
AP_endonuc_2
Acetyltransf_CG
Motif
Other DBs
NCBI-ProteinID:
CCO06106
UniProt:
W0U8G6
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All DBs
Position
II:398685..399683
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AA seq
332 aa
AA seq
DB search
MANQAKTINQKGDLMSYRPDIKLLDATIRDGGLVNNFGFSDEFVKELYKTNIKSGVEYME
FGYKASKELFDVKEFGKWKFCDEEDIRAIVGENDSPLKLSVMADVGRCDFKKDILPKSES
VIDMIRIATYTHQMPGALEMINYCHDMGYETTINIMAVSASREDDIAQALDLVAKSPVDV
IYLVDSYGSLFPEQVRRLTAQYCEVAEASGKKVGVHMHNNQQLAFANTIESISHGASFAD
ATMSGMGRGAGNCFMEQMLSFLRNPNYKLTPTLKFVEKYVAEERAKGSQWGYDVPYMLTG
ALNRHPRAAIAFLKDNRTDYNELYMDLLNELS
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatcaggcaaagacaataaatcagaaaggtgaccttatgtcataccgtcctgat
ataaagcttctggacgcaactatccgtgacggaggtcttgtaaataattttggattttca
gacgagtttgtaaaagaactctataaaactaacataaaatcaggcgttgaatacatggag
ttcggctacaaggcttctaaggagctttttgacgttaaggagttcggtaagtggaagttc
tgtgatgaggaggatatcagagctatcgtgggcgagaatgacagccctctgaagctttct
gttatggctgatgttggcagatgtgatttcaagaaagatatcctgccaaagagcgagagc
gttatcgacatgataaggatcgcaacatatactcatcagatgcctggtgcgctggagatg
ataaactactgccacgatatgggctatgaaactactatcaacatcatggctgtttctgcg
agccgtgaggacgatatcgcacaggctcttgaccttgtggcaaaaagccctgttgacgtt
atttatcttgttgacagctacggctcacttttcccagagcaggtgagaagacttactgcg
cagtattgtgaagtggctgaggctagtggcaaaaaggtgggcgttcatatgcacaacaac
cagcagcttgcttttgcaaacactatcgagagcatttctcacggtgcaagctttgctgac
gctacaatgagcggcatgggaagaggtgcaggaaactgcttcatggagcagatgctcagc
ttcctgagaaaccctaactacaagcttactcctacactgaaatttgttgaaaagtacgtt
gctgaggagagggcaaagggttcacagtggggctatgacgtgccttatatgctcacaggt
gcgctcaaccgccaccctcgtgcggctatcgcattcctgaaggataacagaacagattac
aacgaattgtatatggatcttcttaacgagttgtcataa
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