Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_II00353
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Entry
RBI_II00353 CDS
T03158
Name
(GenBank) Transcriptional regulator
KO
K03709
DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
Organism
rus
Ruminococcus bicirculans (ex Wegman et al. 2014)
Brite
KEGG Orthology (KO) [BR:
rus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rus03000
]
RBI_II00353
Transcription factors [BR:
rus03000
]
Prokaryotic type
Helix-turn-helix
Other families
RBI_II00353
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fe_dep_repr_C
Fe_dep_repress
DUF7343
HTH_45
MarR_2
HTH_27
HTH_34
wHTH-PRTase_assc
WHD_DUF6293
HTH_5
DUF6429
DUF5669
PaaX
HTH_Crp_2
Rrf2
Mrr_N
HTH_24
TyrRSs_C
MarR
TrmB
HVO_A0261_N
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
CCO06114
UniProt:
A0AAP3QLN5
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All DBs
Position
II:405200..405571
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AA seq
123 aa
AA seq
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MQIRESAENYLETILILSQRKGKGEVRSIDIVNELEFSKPSVSVAMKNLRENGYITVDKD
GYIRLTDKGLEIAEKMYERHTLLSQWLIKLGVDEKVAVEDACRMEHVISAESFAAIKKHT
GMA
NT seq
372 nt
NT seq
+upstream
nt +downstream
nt
atgcagataagagaatcagctgaaaattatctcgaaacgatacttattctcagccagcgc
aagggcaaaggcgaggtaagaagcatagatatagtaaacgaacttgagttttcaaagccg
agcgtaagtgtggcaatgaaaaatctccgtgagaacggctatataactgtcgacaaggac
ggttatattcgtttgacagacaagggcttggagatagccgagaaaatgtatgagcgtcat
acgttgctttcacagtggctcataaagcttggtgttgacgagaaagttgcagtagaggac
gcttgccgtatggaacacgttatcagtgcggagtcctttgcggctatcaaaaagcacaca
ggtatggcttga
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