Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_II00415
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Entry
RBI_II00415 CDS
T03158
Symbol
sig17
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
rus
Ruminococcus bicirculans (ex Wegman et al. 2014)
Brite
KEGG Orthology (KO) [BR:
rus00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
RBI_II00415 (sig17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rus03021
]
RBI_II00415 (sig17)
Transcription machinery [BR:
rus03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RBI_II00415 (sig17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
HTH_29
GerE
MarR_2
HTH_36
HTH_38
TnsD
HTH_24
HTH_23
HTH_7
Terminase_5
Motif
Other DBs
NCBI-ProteinID:
CCO06172
UniProt:
A0AAW5KNX0
LinkDB
All DBs
Position
II:complement(475644..476459)
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AA seq
271 aa
AA seq
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MTNEELISKYYDGNMQALYDLYEQNVGFIQSVAAAVAKDYKNYLRFSDTFEDLVQVGSLT
FFEKLKAKKYDARKGSLLTYLTPQLRYAMQEFIENFSSPAGLSHSDFSKIQRCRKLHNEG
MSNSDISKELGMDRKTVQSCLSFSFKTETLMIRAETENGIEYIENPGLVVNDLHPDNKVY
IEVSLELFKELFENLSARDREILGRKYGAFGYEETSVNDIADYMLITRNAVNKAVNSATE
ILRKEYHNGSKLKWWRLCNRAVKDALEGRTA
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatgaggaactgatatcgaaatattatgacggtaatatgcaagctttatatgat
ctgtacgagcagaatgtcgggttcatacagagcgttgctgctgcggtcgcaaaagactac
aaaaattatttgcgtttcagcgatacctttgaagaccttgttcaggttggcagtttgacg
ttctttgaaaagctgaaagcaaaaaaatatgacgcaagaaagggcagtctactgacatat
cttactccccaacttcgatatgcaatgcaggagtttattgaaaatttcagttctccggca
ggactttcacattccgatttctcaaaaatacaaagatgccgcaagctgcataatgaaggt
atgtcaaattcggatatatccaaggagcttggcatggacaggaaaaccgttcaaagctgt
ctgtcattctcttttaaaacggaaacgctgatgatacgggcggaaacagagaacggaatt
gagtacattgaaaatcctgggcttgtcgttaacgatctgcaccccgataacaaggtttac
attgaagttagccttgagcttttcaaggaattgtttgaaaacttatcagccagggacaga
gaaattctcggcagaaaatatggtgcattcgggtatgaagagacctccgttaacgacatt
gcggactatatgctgatcaccagaaacgctgtaaacaaggctgttaattctgcaacagag
attcttcgcaaggaataccataacgggagtaagctgaaatggtggcggttgtgtaaccgg
gcggttaaggatgccttggagggtaggacagcatag
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