Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_II00440
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Entry
RBI_II00440 CDS
T03158
Name
(GenBank) hypothetical protein
KO
K07250
4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:
2.6.1.19
2.6.1.22
2.6.1.48
]
Organism
rus
Ruminococcus bicirculans (ex Wegman et al. 2014)
Pathway
rus00250
Alanine, aspartate and glutamate metabolism
rus00280
Valine, leucine and isoleucine degradation
rus00640
Propanoate metabolism
rus00650
Butanoate metabolism
rus01100
Metabolic pathways
rus01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rus00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
RBI_II00440
00650 Butanoate metabolism
RBI_II00440
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
RBI_II00440
00280 Valine, leucine and isoleucine degradation
RBI_II00440
00310 Lysine degradation
RBI_II00440
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
RBI_II00440
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rus01007
]
RBI_II00440
Enzymes [BR:
rus01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.19 4-aminobutyrate---2-oxoglutarate transaminase
RBI_II00440
2.6.1.22 (S)-3-amino-2-methylpropionate transaminase
RBI_II00440
2.6.1.48 5-aminovalerate transaminase
RBI_II00440
Amino acid related enzymes [BR:
rus01007
]
Aminotransferase (transaminase)
Class III
RBI_II00440
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
Beta_elim_lyase
Znf_XAF1_N
Motif
Other DBs
NCBI-ProteinID:
CCO06197
LinkDB
All DBs
Position
II:complement(507550..508914)
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AA seq
454 aa
AA seq
DB search
MLRNSLPTIITDKVPGPNACVLLKKRDNALPKALCGYTYPICIKRGEGAMLEDVDGNIFL
DFIGGVGVLNIGYSRPEVVKAVQDQAEKYFHCIFNVVAHSGYIELADRLNKLMPCKGDKL
KTFFANSGAEADENAVKIAKAYTGRKGIICFSGAFHGRTNLTMALTAKKSYAKGMGPFPS
DIYRAEFPYLYHAPKGYSEQEAIAYYLDKLNTLFDEAAPASDIAAMIVEPVQGEGGFVPA
PIEWVKAVRKICDDNGILLIADEVQCGNCRSGRYYASEYWKEAGAAPDIIATAKSLGGGV
PISAITAREEIMDSVPVGTIGGTYCGNPLACASALKVMDIMLEEDYAGKAEEIGKKATIF
FSGLKEKYEEVGDVRGLGSMLGVKFVKTKAEKEPNGELVSKVIQNALQMGLMLENAGTHG
NVIRFLVPLCVTDEQLEKGFEIFETALVKAKSDK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgctaagaaattcattgccaactataattacagataaggttccaggaccaaatgcctgt
gtacttttgaaaaaaagggacaacgcactgcctaaagcgctctgtggctatacatatcct
atatgtatcaagcgtggagagggcgcaatgctcgaagatgttgacggaaacatctttctt
gattttatcggaggtgtcggcgttctcaacatcggctacagcagacctgaggtcgtgaaa
gctgttcaagatcaggcagaaaaatattttcactgcattttcaatgtggtggcacacagt
ggttacattgaacttgctgataggctcaacaaacttatgccatgcaaaggtgataaactg
aaaacattctttgcaaacagcggtgcagaggcagatgagaatgcagtaaagatagccaaa
gcatatacaggaagaaaaggcatcatctgcttctctggtgcattccacggaagaacaaat
cttacaatggctcttacagcaaaaaaatcttatgcaaagggaatgggtcctttcccgtct
gatatttacagagctgagttcccttacctttatcatgcaccaaaaggatattctgaacaa
gaagcaatagcatattacctagacaaactcaacactctttttgatgaagctgcacctgcc
agtgatattgcagcaatgatagtcgaacctgttcaaggagagggtggttttgtccccgca
cctatcgaatgggtaaaagccgtcagaaagatatgcgacgataatggtattttacttatt
gctgatgaagtacagtgtggaaactgtcgaagtggcagatactatgcctcagaatattgg
aaggaagcaggtgctgcaccagatattatagcaacagcaaaatctcttggcggcggcgtt
ccaataagtgcaataaccgcccgtgaggaaattatggattcagtacctgtgggaactatt
ggcggaacatattgtggaaatcctcttgcctgtgcttctgcactcaaggtaatggatata
atgctggaagaagattatgcaggcaaagctgaagaaataggtaaaaaggcaactatattt
ttcagcggtcttaaagaaaaatatgaagaggtaggagatgtaagaggtcttggctcgatg
cttggcgtgaaatttgtaaagactaaagcagaaaaagaaccaaacggcgaacttgtttct
aaggtgatacagaacgcccttcaaatgggacttatgcttgaaaatgctggcacacacgga
aacgttataagatttcttgtccctctgtgtgtaacagacgaacaacttgaaaaaggcttt
gagatatttgagaccgctttggtaaaagcaaagtctgataaataa
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