Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_II00561
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Entry
RBI_II00561 CDS
T03158
Name
(GenBank) hypothetical protein
KO
K06400
site-specific DNA recombinase
Organism
rus
Ruminococcus bicirculans (ex Wegman et al. 2014)
Brite
KEGG Orthology (KO) [BR:
rus00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99978 Cell growth
RBI_II00561
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Gene cluster
GFIT
Motif
Pfam:
Resolvase
Recombinase
Zn_ribbon_recom
Prok-RING_1
Lig_chan-Glu_bd
Motif
Other DBs
NCBI-ProteinID:
CCO06315
UniProt:
A0ABP1WQK6
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All DBs
Position
II:complement(620498..622114)
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AA seq
538 aa
AA seq
DB search
MSTAPNVTVIPAKVQTTENRDKYHQLRVAAYCRVSTEQEEQQNSYQVQIAYYTDLINRKK
EWTLAGVFADEGISGTQTKKRTEFNRMIRMCKNKKIDLVITKSISRFARNTVDCLEYVRQ
LKDLGIGVIFEKENINTLTMTSEFMIALYGSFAQAESESISKNVSWGKEKAYREGKVSFQ
YKYLLGYKKGADGKPEIVPNEAETVRLIFSLYLDGYTLHNIAQTLMNQKRITATGKSEWS
KGEIQRILKNEKYVGDALLQKTFTVDCITHKVVKNNGERPMYLITDHHTPIIDRDTFNRV
QQEIARRSSKRKISDHTKTEQGKYSGKYALSELLICGNCGTPYRRRIWTKNGKKQVVWRC
ISRLEHGKKYCPDSPTIKEENLHRGIIRSINNYYSCRDDIVRILKANIGSVLECQGQEEI
LSIEKRLKEIDQARTDLVGLIVSGGCDEDKLDSEFAKLYAEEQELSERLEMLKSQNKTSA
ETQQKLDKITDMIEHEKFELETFDNVLIRKLIECVKVLSKTEILVIFKGGYEVRTEIE
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgtccacagctccgaatgtaacggtaatccctgcgaaagtgcagacaacggaaaaccgt
gataaatatcaccaattaagagttgccgcatactgccgtgtcagcacagaacaagaggaa
cagcagaattcatatcaggtacagatcgcctattacaccgatttgatcaaccgaaaaaag
gaatggacgcttgccggagtttttgccgacgaagggatcagcggaactcagacaaagaaa
aggacagagtttaaccgaatgataagaatgtgcaaaaacaaaaagatcgaccttgtgata
acgaaatcaatttcaagatttgcccgaaatacggtggattgccttgaatatgttcgacag
cttaaagacttgggtattggcgtgatttttgaaaaggaaaacataaacacgctgacaatg
acaagcgagtttatgattgctttgtacggttcattcgcacaggctgaaagtgaatccata
agcaaaaatgtttcatggggaaaggaaaaagcctaccgtgagggcaaggtgtcctttcag
tataaatatctgctgggttacaaaaaaggtgcagacggcaagccggagatagttcccaat
gaggctgaaactgtacggttgatcttcagtctttatcttgacggatataccttacataac
atcgctcagaccttaatgaatcaaaaaagaattaccgcaactggtaaaagtgagtggtct
aagggtgaaattcagagaattctgaaaaatgagaagtatgtgggagatgcacttttgcaa
aaaactttcacggtcgattgcattacacacaaagttgtgaaaaataacggagagcgcccg
atgtatcttattacagatcatcatactcccataatcgatcgtgatacctttaaccgagta
cagcaggaaattgcaaggcgaagttcaaaaagaaaaatatccgatcataccaaaacagag
caaggaaaatacagtggaaaatatgcattgtccgaattgttgatatgcggaaattgcgga
actccgtacaggcgcagaatatggacaaaaaacgggaaaaagcaagtggtctggcggtgt
atcagccgtctggaacacggtaaaaaatactgccccgattcgcctacgatcaaggaagaa
aacctgcaccgtggaattattcgttcgataaataactactattcctgccgtgacgatatt
gttcggatattaaaagctaatatcggatcggtgttggagtgccaggggcaggaggaaata
ctttcgattgaaaagcgactgaaagagatcgaccaagcaagaacggatctggtcggactg
atagtttccggcggctgtgacgaggacaagcttgacagtgagtttgcaaagctttatgcc
gaggaacaagagttaagcgaacgattggaaatgctcaaatcgcagaataaaacttctgcc
gaaactcagcaaaagcttgataagatcacggacatgatagagcatgaaaaattcgagttg
gaaacctttgataatgtgttgatcagaaagctcatcgaatgtgtaaaagtcttaagtaaa
accgaaatactggtgatcttcaagggcgggtatgaagtcagaacggaaattgaataa
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