Ruegeria sp. THAF33: FIU92_00055
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Entry
FIU92_00055 CDS
T06269
Symbol
rnz1
Name
(GenBank) Ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
rut
Ruegeria sp. THAF33
Brite
KEGG Orthology (KO) [BR:
rut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rut03016
]
FIU92_00055 (rnz1)
Enzymes [BR:
rut01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
FIU92_00055 (rnz1)
Transfer RNA biogenesis [BR:
rut03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
FIU92_00055 (rnz1)
Prokaryotic type
FIU92_00055 (rnz1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B_4
Lactamase_B
TAT_signal
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
QFT71411
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All DBs
Position
11872..13338
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AA seq
488 aa
AA seq
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MTKEDTGKDLDNKQGQPTEQIEDPSRRSVLKGLATGAAATGAAGFAAGSAEAHEGDGPLG
ETLKNPYGGRPAGGISLPEYFRPTKYMTGSNANYFPLSEELGPDEMRISFCGSTPYPPRE
DQAGTCIMVELGNGKRFFFDFGSGCVRNIVAMQVPGQLINDIFISHLHVDHYADIPYIYP
FRAWSGGYTPLRIHGPSGRTPELGTAGMVKGMQQMLKWHLEAFDVFPIGDGYEIEVNEFD
FRQEGGIVYDEDGVTVRSWPRSHAKDGAVGYRLDWNGLSFVWTGDGRPDELSRKYGEGVD
VFVTEMSGQDIGQLMTYKYGIPQDLFNYTIDTHHTSHYAVGKLFADTRPRLGMVTHYTQD
EDIDAEMLAGIRAHYDGLFQWGLDVAVVNVTKDAIWYRKAALPGKSGTVPPFRELAAAAE
AGRIELPDEITLPNPRLTRADQQDQKYRDMEIDPREYYPTDVFRAPGGDWPQDFTIKVSD
VIGTRDED
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgactaaggaagacactgggaaagacctggacaacaaacaggggcaaccaacagagcaa
atcgaagacccgtcgcggcggagtgttctaaagggcttggccactggagcggccgcgaca
ggggcagctgggtttgcggcaggaagtgccgaggcccacgaaggagacggccccctggga
gaaacactcaagaacccatatggcggtcgacccgcaggcggcatatcattgccagagtac
ttccgcccgacgaagtacatgaccggttcaaacgcgaactattttccactgagtgaggag
ttggggccagatgagatgcgcatctcattctgtggttcaacaccgtatccaccgcgcgaa
gatcaggcgggtacttgtatcatggtggagttggggaatggaaagcggttcttcttcgat
tttggctccggttgtgtccgcaacatcgttgccatgcaagtaccggggcaactgatcaac
gacatcttcatctctcacctacatgtcgaccactatgccgacattccgtatatttacccg
ttccgtgcctggtcgggtggctacacgccattgcgcattcacggtccctctggtcggaca
ccggaacttgggaccgccggaatggtcaaaggcatgcaacagatgctcaaatggcatcta
gaggcctttgatgtgttcccgattggggacggctacgagatcgaagtcaatgaattcgat
ttccgtcaggaaggcggcatcgtttatgacgaagatggcgtgactgtccggtcctggcca
cgaagccatgccaaggacggtgcggttggctatcgactcgattggaacgggctgagcttt
gtatggaccggcgatggtcgcccggatgagctttcacgaaaatacggcgaaggtgttgat
gtctttgtaaccgaaatgtcgggacaggatattggtcagctgatgacctacaaatatggt
atcccacaagatctctttaactacactatcgatacgcatcacacctcccactatgccgtg
ggtaagctctttgctgacacaaggccgcgtttgggaatggtgacacactatacccaggac
gaagacatcgatgcagaaatgctggctggtattcgcgcccactacgacggtctgttccaa
tggggtctcgatgtagccgttgtgaacgtgaccaaggatgcaatctggtacaggaaagct
gcactgcccggaaaatccggtactgttccgccattccgcgaactggctgcggcagccgag
gccggacgtatcgagcttccagatgaaatcacactaccgaacccgaggctcacccgagca
gatcagcaagatcagaagtacagagatatggagattgatccacgcgagtactacccaact
gacgttttccgagcacccggcggggactggccgcaggactttaccatcaaagtttcggat
gtaatcggcacgcgtgatgaagactga
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