Ruegeria sp. THAF33: FIU92_00215
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Entry
FIU92_00215 CDS
T06269
Symbol
phr
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rut
Ruegeria sp. THAF33
Brite
KEGG Orthology (KO) [BR:
rut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rut03400
]
FIU92_00215 (phr)
Enzymes [BR:
rut01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
FIU92_00215 (phr)
DNA repair and recombination proteins [BR:
rut03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
FIU92_00215 (phr)
Prokaryotic type
FIU92_00215 (phr)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
QFT71443
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Position
42752..43996
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AA seq
414 aa
AA seq
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MTEMFSELDEAKETFDFKPTRTNGLIRLKQFAGRTGRHYASTRNYDIGTERRSNVSGLSP
WLRHRLITEKEVLATVLASHNFNAAEKFVQEVFWRTYFKGWLEQRPSVWSLYQRDLLSAC
ERLRDDEGLKARFNDAVNGNTGIDCFDHWARELVATGYLHNHARMWFASIWIFSLRLPWQ
LGADFFLRHLLDGDPASNTLSWRWVGGLHTKGKIYLARPDNIAKYTEGRFQPKGLAKFAE
PLTEPVEHPLVPLSSPQMHSDSPYLLLLTEDDLSAHQLMPTSPVAKIGLLATHGRSPNPL
GDVVQDFAKGAMSSVLEAHGKLGQSTEDWCGTLIEAARNAGVTTIATAYAPVGPTRSRLD
RAEPVLRDAGLSLNRIMRPYDALTWPHAKAGFFGLRKKIPSLLRQLNLATQQRP
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagatgttttcagaacttgatgaagcgaaagagacgttcgatttcaaacccaca
cggaccaacggtcttataaggctgaagcagttcgcgggacgcaccgggcgccattacgca
agtacgcgaaactacgatattgggactgagcgtcgcagcaatgtatcgggtttgtcacct
tggctgcgccaccgtttgataacagagaaagaagtactggcaacggttttagcgtcgcat
aatttcaacgcggcggagaaattcgtgcaagaagttttttggcgcacgtacttcaagggt
tggctggaacaaaggcccagcgtctggtcactgtatcagcgggatttgctgagcgcttgt
gagcgattaagggatgatgagggccttaaggcccgtttcaatgatgcagtgaacggcaat
accggcatcgactgtttcgaccattgggcgcgggaactggtggcgacaggctaccttcat
aaccatgcgcgcatgtggtttgcatcaatctggattttttcacttcgcttaccctggcag
cttggcgcggatttctttttgcgacatttgctggatggcgatcccgcatcgaacacgctg
agctggcgctgggttggcggattgcacacgaaaggcaaaatttacctcgcgcgccctgac
aatattgccaaatacactgaaggacggtttcaaccgaaaggcctggccaaatttgcagaa
ccgctgaccgagccggtagaacacccgctcgttcccctttcaagtccgcaaatgcactca
gacagcccttatctgttgctgttgacagaggatgatctgtcagctcatcaattgatgcca
acatcgcctgttgccaagatcggacttttggcgacgcatggtcgatccccaaacccgttg
ggagacgttgtacaggattttgccaagggcgcgatgagcagcgtcttggaagcccacgga
aaactcgggcaatcgaccgaggactggtgtggtacgttgatcgaggcagcacggaatgca
ggtgttacgaccattgcaacagcctatgcgcctgtcggtcccactcggtcacggctggat
cgtgcagaacctgtattgagagacgcaggcctttccttgaacaggataatgcggccgtac
gacgctttaacatggcctcatgcgaaggccgggttcttcggccttcgaaagaagatccct
tcgcttctacgccaactgaacttggccacccaacaaagaccatag
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