Ruegeria sp. THAF33: FIU92_01560
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Entry
FIU92_01560 CDS
T06269
Symbol
rpoH1
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
rut
Ruegeria sp. THAF33
Brite
KEGG Orthology (KO) [BR:
rut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rut03021
]
FIU92_01560 (rpoH1)
Transcription machinery [BR:
rut03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FIU92_01560 (rpoH1)
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
QFT71703
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Position
297773..298651
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AA seq
292 aa
AA seq
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MALDNATDFSMSRQAMKAELLDAETELKLAYAWRDERDEQALHRLITAYMRLAISMAAKF
KRYGAPMNDLIQEAGLGLMKAADKFDPDRGVRFSTYAVWWIKASIQDYVMRNWSMVRTGS
TSSQKSLFFNMRRVQARLEREAATEGQELDRHQLHQMIATEIGVPLRDVEMMEGRLSGSD
FSLNAVQSADEDGREWIDALEDDREQAAEAVEHSHDTEQLRKWLLTAMNALNDRERFIVR
ERKLRDPARTLESLGTELGLSKERVRQLEAAAFAKMRKNLEAQSREVQHFIA
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggcactggataatgcgacggacttttcgatgtcccggcaagcaatgaaggccgagctg
ctggatgcggaaaccgaactgaaactggcttatgcttggcgtgatgagcgtgatgaacag
gcgttgcaccgtctgatcaccgcctatatgcgtctggcgatttcgatggcggccaagttc
aagcgctatggcgcgccgatgaatgatctcattcaggaagcaggccttggcctgatgaag
gccgcagacaagttcgatccagatcgcggcgtgcggttttcgacctatgctgtatggtgg
atcaaggcaagcattcaggactatgtgatgcggaactggtccatggttcggaccgggtca
acctcatctcagaagtcgctgttcttcaacatgcggcgagttcaggcccggctggaacgt
gaagccgccactgaaggtcaggaactggaccgtcatcagttgcatcagatgatcgccacg
gaaatcggtgtgccgctgcgcgacgtcgagatgatggaaggtcgtctgtccggctctgat
ttttcgctgaatgcggtgcaatccgctgatgaggatgggcgcgagtggatcgatgctctg
gaagatgaccgcgagcaggcagccgaagcagttgaacacagccatgataccgaacaattg
cgcaagtggctgttgacggcgatgaatgccttgaatgatcgcgagcgtttcattgtgcgc
gagcgcaagctgcgagaccccgcgcgaaccctggaaagcctgggaaccgagctgggcctg
tccaaggaacgtgtacgacagcttgaggccgcagccttcgcgaaaatgcgcaagaacctt
gaagcccagtcgcgcgaggtgcaacacttcatcgcatga
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