Ruegeria sp. THAF33: FIU92_01735
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Entry
FIU92_01735 CDS
T06269
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rut
Ruegeria sp. THAF33
Pathway
rut03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rut00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FIU92_01735 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rut03021
]
FIU92_01735 (rpoA)
03400 DNA repair and recombination proteins [BR:
rut03400
]
FIU92_01735 (rpoA)
Enzymes [BR:
rut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FIU92_01735 (rpoA)
Transcription machinery [BR:
rut03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FIU92_01735 (rpoA)
DNA repair and recombination proteins [BR:
rut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FIU92_01735 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Glyco_hydro_65C
RepD-like_N
Motif
Other DBs
NCBI-ProteinID:
QFT71738
LinkDB
All DBs
Position
334404..335420
Genome browser
AA seq
338 aa
AA seq
DB search
MIHKNWAELIKPTQLEAKPGNDPARQATLVAEPLERGFGLTLGNALRRVLMSSLQGAAIT
SVQIDNVLHEFSSVAGVREDVTDIILNLKQVALRMEVEGPKRLSINAKGPAVVTAGDISE
SAGIEVLNRDHVICHLDDGADLFMELTVNTGKGYVSAEKNKPEDAPIGLIPIDAIYSPVK
KVAYDVQPTREGQVLDYDKLTLKIETDGSITPEDALAFAARILQDQLSIFVNFDEPESAS
RQDEDDGLEFNPLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSGMGLHLGMDVEDWPPDNIEDLAKKFEDAF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatccacaagaattgggcagaattgatcaagccgacccagctggaagccaagccgggc
aatgatcctgcacgtcaggccaccctggttgccgaaccgctggagcgtggctttggtctg
accctgggcaacgccctgcgccgcgtcctgatgagctcgctgcaaggtgcggccatcacc
agcgtccagatcgacaacgtcctgcacgagttttcgagcgtggcaggcgttcgtgaagac
gtcaccgacatcatcctgaacctcaagcaggttgccctgcgcatggaagtcgaaggcccc
aagcgcctgtcgatcaatgccaaaggccccgcggtcgtcactgcgggtgacatcagcgaa
agcgccggcatcgaggttctgaaccgcgatcacgtcatctgccacctcgacgatggcgct
gacctgttcatggagctgaccgtcaacaccggcaagggctatgtctcggccgagaagaac
aagcccgaagacgcacccatcggcctgatcccgattgatgcgatctattcgccggtcaaa
aaggtcgcttatgacgttcagccgacccgtgaaggtcaggttctggactatgacaaactg
accctgaagatcgaaaccgatggttcgatcacgccggaagacgcactggcctttgccgct
cgtatccttcaggatcagctgtcgatcttcgtcaacttcgacgagccggaatcggcaagc
cgtcaagacgaggacgatggtctggagttcaacccgctgctgctgaagaaggtggacgag
ctggaactgtcggtccgttcggcaaactgcctaaagaacgacaacatcgtctatatcggc
gacctgatccaaaagaccgaagccgagatgctgcgcaccccgaacttcggccgcaagtcg
ctgaacgagatcaaggaagtgctgtccggcatgggcctgcacctgggcatggatgtcgag
gattggccgccggacaacatcgaagatttggccaagaaattcgaagacgcgttctaa
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