Ruegeria sp. THAF33: FIU92_04480
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Entry
FIU92_04480 CDS
T06269
Symbol
glyA1
Name
(GenBank) Serine hydroxymethyltransferase 1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rut
Ruegeria sp. THAF33
Pathway
rut00260
Glycine, serine and threonine metabolism
rut00460
Cyanoamino acid metabolism
rut00630
Glyoxylate and dicarboxylate metabolism
rut00670
One carbon pool by folate
rut00680
Methane metabolism
rut01100
Metabolic pathways
rut01110
Biosynthesis of secondary metabolites
rut01120
Microbial metabolism in diverse environments
rut01200
Carbon metabolism
rut01230
Biosynthesis of amino acids
rut01240
Biosynthesis of cofactors
rut04981
Folate transport and metabolism
Module
rut_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rut00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
FIU92_04480 (glyA1)
09102 Energy metabolism
00680 Methane metabolism
FIU92_04480 (glyA1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FIU92_04480 (glyA1)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
FIU92_04480 (glyA1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
FIU92_04480 (glyA1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
FIU92_04480 (glyA1)
Enzymes [BR:
rut01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
FIU92_04480 (glyA1)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QFT72274
LinkDB
All DBs
Position
complement(862348..863643)
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AA seq
431 aa
AA seq
DB search
MNANLRDTGFFTQSLSDRDPELFGSITSELGRQRDEIELIASENIVSAAVMEAQGSVMTN
KYAEGYPGRRYYGGCQFVDIAENLAIDRAKQLFGCEFANVQPNSGSQANQGVFQALIKPG
DTILGMSLDAGGHLTHGARPNQSGKWFNAVQYGVRQQDNMLDYDQVEALAKEHQPKLIIA
GGSAIPRQIDFARMRQIADMVGAYLHVDMAHFAGLVAAGEHPSPFPHAHVATTTTHKTLR
GPRGGMILTNDEDIAKKVNSAIFPGIQGGPLMHVIAAKAVAFGEALRPEFKDYVKQVITN
AQALSDQLIKGGLDTVTHGTDTHVVLVDLRPKGVKGNATEKALGRAHITCNKNGVPFDPE
KPTITSGIRLGSPAGTTRGFGEVEFRQIADWIIEVVDGLAANGEDGNGAVEAKVKAEVAD
LCAKFPIYPNL
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccaatcttcgtgataccggatttttcacccagtccctttctgatcgtgatccc
gagctttttggctcgatcacgtcggaactgggtcgtcagcgcgacgagatcgagctgatc
gcgtccgagaacatcgtctctgccgccgtgatggaggcgcagggctcggtgatgaccaac
aaatacgccgaaggctatcccggccgccgctattatggcggctgccagttcgtcgacatc
gccgaaaacctggccatcgaccgcgccaagcagctgttcggctgtgaattcgccaacgtg
cagcccaattccggctctcaggccaaccagggcgtgtttcaggcgctgatcaagcccggc
gacaccattctgggcatgagcctggatgccggcggtcacctgacccacggcgcccgtccg
aaccagtcgggcaagtggttcaacgcggtgcaatacggcgtgcgccagcaggacaacatg
ctggattacgatcaggtcgaagcgctggcgaaggaacaccagcccaagctgatcatcgcc
ggcggttcggccatcccgcgccagatcgactttgcccgcatgcgtcagatcgccgacatg
gtcggtgcctatctgcacgtggacatggcgcatttcgccggtctggtcgcggcgggcgag
catcccagcccgttcccgcatgcgcatgtggccaccaccaccacgcacaagaccctgcgc
ggcccgcgcggcggcatgatcctgaccaatgatgaagatatcgccaagaaagtgaactcg
gccatcttccccggcattcaaggcggcccgctgatgcatgtgatcgcggccaaggccgtg
gcctttggcgaggcgctgcggcccgagttcaaggactatgtcaagcaggtgatcaccaac
gcccaggcactgtcggatcagctgatcaagggcggtctggacacggtgacccacggcacc
gacacccatgtggtgctggtcgacctgcgccccaaaggcgtcaagggcaacgccaccgag
aaagccttgggtcgcgcgcatatcacctgcaacaagaacggcgtgccgtttgaccccgaa
aagccgaccatcacatcgggcatccgtctggggtcgcccgccggcaccacccgcggcttc
ggcgaggtcgaattccgccagatcgccgactggatcatcgaagtggtcgacggcctggcc
gccaatggcgaagacggcaacggcgccgtcgaggccaaggtcaaggccgaagtcgcagac
ctctgcgccaaattcccgatctatccgaacctgtaa
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