Ruegeria sp. THAF33: FIU92_05805
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Entry
FIU92_05805 CDS
T06269
Symbol
rluD
Name
(GenBank) Ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
rut
Ruegeria sp. THAF33
Brite
KEGG Orthology (KO) [BR:
rut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rut03009
]
FIU92_05805 (rluD)
Enzymes [BR:
rut01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
FIU92_05805 (rluD)
Ribosome biogenesis [BR:
rut03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FIU92_05805 (rluD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QFT72534
LinkDB
All DBs
Position
1135821..1136855
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AA seq
344 aa
AA seq
DB search
MGTRQIEFQIAADPPPRLDKALSRDVPDGENLSRTRLARLIEGGAVQIDGAEIRDPKAKV
VEGARVTIAVAEAEDSHIGPEDISLEILFEDADVIVVNKPAGMVVHPAPGSPSGTLVNAL
LHHCGDDLSGVGGVKRPGIVHRIDKETSGLLVVAKSDAAHHGLAEQFAAHSVERYYRAVC
YGVPDANDPRLRGVKGISFEPGNIMRVTTQLARHKTDRQKQAVLFHGGRHAVTRARVVET
FGVPAGLALIECWLETGRTHQIRVHMAHAGHGLVGDPVYGGKRKLSAKAFSAAAAAFVGA
FPRQALHAAVLGFEHPVTGESLRFEADLPQDMRCLVERLRAPLS
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgggcacccgccagattgagtttcagatcgcggccgatccgccgcctcgccttgataag
gcgctttcccgcgatgtgccagacggggaaaacctgtcgcgcacccgacttgcgcgtctg
atcgaagggggcgcggtacagatcgacggtgccgagatacgcgaccccaaggccaaggtg
gtggaaggggcgcgggtcacgattgccgtggccgaggccgaagacagccatatcggcccc
gaggacatctcgctcgagattctcttcgaggatgcggacgtaatcgtcgtcaacaaaccc
gcaggcatggtcgtacaccctgcgccgggatcacccagcggtactctggtgaatgctttg
ctccaccattgcggagacgatctgtcgggcgtcggcggggtgaaacgccccggtatcgtg
catcgcatcgataaggaaaccagtggtcttctggtggtcgcaaagtcagacgcggcgcat
cacggtctggccgagcaattcgcggcgcatagcgtcgaacggtattaccgtgcggtgtgt
tacggggtgccggatgccaacgatcctcggttgcgcggtgtcaaagggatcagctttgaa
cccggcaacatcatgcgcgtcacaacgcaacttgcgcgacacaagaccgaccgtcaaaaa
caggcggttctgtttcatggcgggcggcatgccgtgacacgcgcacgcgttgtcgagaca
tttggtgtgccggcgggtcttgccctgatcgagtgctggcttgaaaccggccgaacgcat
cagatccgcgttcatatggcccacgcagggcacgggctggtgggcgacccggtttatggc
ggcaagcgcaagctgtccgccaaagcgttctccgccgccgccgccgcttttgtaggcgct
tttccccgtcaggcgcttcatgctgctgttttgggattcgagcaccctgtcaccggtgaa
tccctgcggtttgaggctgacttgccgcaagatatgcgatgccttgtcgaacgtctgcgc
gcaccgctgtcataa
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