Ruegeria sp. THAF33: FIU92_06165
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Entry
FIU92_06165 CDS
T06269
Symbol
polC
Name
(GenBank) DNA polymerase III PolC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rut
Ruegeria sp. THAF33
Pathway
rut03030
DNA replication
rut03430
Mismatch repair
rut03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FIU92_06165 (polC)
03430 Mismatch repair
FIU92_06165 (polC)
03440 Homologous recombination
FIU92_06165 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rut03032
]
FIU92_06165 (polC)
03400 DNA repair and recombination proteins [BR:
rut03400
]
FIU92_06165 (polC)
Enzymes [BR:
rut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FIU92_06165 (polC)
DNA replication proteins [BR:
rut03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FIU92_06165 (polC)
DNA repair and recombination proteins [BR:
rut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FIU92_06165 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
RNase_H_2
DNA_pol_A_exo1
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
QFT72606
LinkDB
All DBs
Position
complement(1206434..1207846)
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AA seq
470 aa
AA seq
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MLTGLSLRLRIFLFFCLLALGGVAISATALWITYSRAGNPGLLNDFVFAEILIGFGFLAL
VAGVWLLFDDNVAKPIERLSAQLRARAHAGVSTDLDMQAARYLGDLAPAAAGLAEQLASN
AMRTAEAVAAETAHLAAEKQRLTALLTEIPVAMLLASPKHQIVLYDGQAAEVLAQIAHPR
LNASLFEYLEATGLTDAYAKMCKTGKDVYCTLSSVDGRQTYSARMKPLGDAPGYMLVFED
SATHMSPDDARPLVYDFELLNTPGDDAFENRPLSDLCFVVFDTETTGLLPHKDEIVQIGA
VRVLNGKIVQGEHLDMLVDPGIPIPPASTKVHKISDRMVQGAPDIAEAGRVFHQFSRDAV
IVAHNAPFDMAFLRRHAKRMGVEWDHPILDTVLLSAVLFGASDTHTLDALCERLEITIPE
TLRHTALGDAVATAEALIKMLPILQARGLTTFGEVIMETRKHGRLLEDMN
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccggattgagtttgaggctcaggatttttctgttcttctgcctcctcgccctg
ggcggggttgccatcagcgccaccgctctctggatcacctattcccgcgcgggaaacccc
gggctgctgaatgatttcgtctttgccgaaatcctgatcggatttggatttctggcgctg
gtcgcgggggtttggctgctgttcgacgacaacgtcgccaaaccgatcgaacggctttcc
gcccagttgcgtgcccgtgcacatgccggtgtaagcaccgacctagacatgcaggccgcg
cggtatctgggcgatcttgccccggctgcggcgggattggcggaacaactggcctcgaac
gccatgcgcacggccgaggccgtagccgccgaaaccgcgcatctggccgcagaaaaacag
cgcctgaccgcgctgctgacggaaatcccggtggccatgctgctggccagtccgaaacat
cagatcgttctgtacgacggtcaggccgccgaggttcttgcccagatcgcgcatcctcgt
ctgaacgcatctctttttgaatatctcgaagccaccggcctgacggacgcatatgccaag
atgtgcaaaaccggaaaggacgtctattgcaccctctccagcgtggacgggcggcagacc
tattccgcccggatgaaacccttgggggatgcacccggatatatgcttgtcttcgaagac
agcgcgacacatatgtcaccggacgatgcccgcccgctggtctatgatttcgaacttctc
aatacaccgggggatgatgcgttcgagaaccgccccctgtcggatctgtgtttcgtggtt
ttcgacacggaaacaaccggtttgctacctcacaaggatgagatcgtgcagatcggcgca
gtacgcgttctgaatggcaaaatcgttcagggcgagcatctggacatgctggttgatccc
ggcattccgattcccccggcctcgaccaaagtacacaagatcagcgatcgcatggttcag
ggggcgcccgatattgccgaagccgggcgcgtattccatcagttttcgcgcgacgcggtg
atcgtggcgcacaatgccccgttcgacatggcgttcctgcgccgccatgccaaacggatg
ggtgtcgagtgggatcatccgatactcgacacggttttgctgtctgcggtgctgttcggg
gcaagcgatacgcacacactggatgccttgtgtgaacggctggaaatcacgatccccgaa
acgttgcgccataccgcactgggcgacgcggttgccacggccgaggcattgatcaagatg
ctgccgatcctgcaagcccgcggtctgacaacctttggcgaagtgattatggaaacccgc
aaacacggtcgtttgctggaagatatgaactga
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