Ruegeria sp. THAF33: FIU92_06590
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Entry
FIU92_06590 CDS
T06269
Name
(GenBank) hypothetical protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
rut
Ruegeria sp. THAF33
Pathway
rut02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rut00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FIU92_06590
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rut02000
]
FIU92_06590
Transporters [BR:
rut02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
FIU92_06590
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
Motif
Other DBs
NCBI-ProteinID:
QFT72690
LinkDB
All DBs
Position
1302847..1303938
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AA seq
363 aa
AA seq
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MKKTKTLLTAAAVGAVAGGAFAEEMTIVSWGGAYSKSQLKAYHEPYSEKTGVTILNDDSS
AEAVAKLRAMNEAGNITWDVVDVVAADAIRLCDEGLALEIDFDTQLAPAPDGTPASEDFG
DLLVSDCFIPQIVYSTTFGYRTDLVGDTPPTDICAVFDLEAYPGKRSLEKRPINNMEWAL
LCDGVAKEDVYDVLATPEGQDQALAKLDTIKDSVVWWSAGADTPQLLADGEVVMGSTYNG
RLFSVIEEQKQPVAMLWDAQVFDLDGWIIPAGLSEERQKRALDYIMFATDTQRLADQAKY
ISYGPARASSAPLVGKHAELGIDMAPHMPTDPENAKNTFLYNYEFWADYRDDIDAKFQAW
LAQ
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaccaaaacattgttgacagcagctgcagttggggcggttgccggcggtgcg
ttcgccgaggagatgacgatcgtttcctggggcggcgcttattccaaatcgcagctgaag
gcgtatcacgagccctattctgaaaagacaggtgtcaccatcctgaatgatgacagctcg
gccgaagcggttgcaaaactgcgcgcgatgaacgaagccggcaatatcacctgggacgtg
gtcgatgttgtggccgcagacgcaattcgtctgtgtgacgaagggcttgcgctggaaatc
gactttgacacccagcttgcgcctgcgccggatggcacacctgcctcggaagatttcggc
gacctgttggtcagcgactgctttattccgcagatcgtgtattcgaccaccttcggttac
cgtactgacctggtcggcgatacacccccaaccgatatctgcgctgtattcgatctggaa
gcttaccccggcaagcgctcgttggaaaaacgcccgatcaacaatatggaatgggccctt
ttgtgcgatggcgtcgcgaaggaagatgtctatgacgttctggccactccggaaggtcag
gatcaggcgctggccaagttagacaccatcaaagacagcgttgtctggtggtctgcgggt
gccgacacgccgcagctgctggccgatggagaggttgtcatgggttctacctataacggc
cgtttgttcagcgtaatcgaagagcagaagcagccggtcgccatgctttgggacgctcag
gtgttcgatctggatggttggatcattcccgccggtctgagcgaagagcgtcagaagcgc
gcgctggactacatcatgttcgcgaccgatacccagcgtctggcggatcaggccaagtac
atctcgtacggcccggcccgtgcatcgtcggctccgctggtgggtaagcatgccgaactg
ggtatcgatatggcaccccatatgccaaccgatccggaaaacgccaagaacacgttcctg
tacaactatgagttctgggcggactaccgtgacgacatcgacgccaaattccaggcgtgg
ctggcgcaataa
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