Ruegeria sp. THAF33: FIU92_07730
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Entry
FIU92_07730 CDS
T06269
Name
(GenBank) murein L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
rut
Ruegeria sp. THAF33
Brite
KEGG Orthology (KO) [BR:
rut00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rut01002
]
FIU92_07730
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rut01011
]
FIU92_07730
Peptidases and inhibitors [BR:
rut01002
]
Cysteine peptidases
Family C82
FIU92_07730
Peptidoglycan biosynthesis and degradation proteins [BR:
rut01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
FIU92_07730
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QFT72914
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All DBs
Position
complement(1520381..1521988)
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AA seq
535 aa
AA seq
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MLSVFRTRTSILLAACFAATASMANTTSEPAHNTAFQMAVAEHTPRESQIAEFYRTNGFS
PIWVGESDEHMQRRAALIQALSHAHLHGLPRADATVSSLMQKMQDARSTRDLGAVEAELS
RVFVEFADALYSGFLRPGNIDDGLVRSVDRRSAAEHLNVLNTHGAAYLAQLAPQTRQYRA
LMKQKLALQDLVDQGGWGATVPETKLEYGDTGPNVVKLRNRLALMGYMKPSASPSFDAAL
LEGVRAFQIAHGLEPDGVAGKGTIAELNRPAVDRLKAVYVALERERWLPRERGARHILVN
QTDFSAKIVDDGQVTFETRAVIGKNTHDRRSPEFSDVMEHMVINPSWYVPRSIITKEYLP
KLKANPNAVSHIQITDSRGRQVNRGAVDFNQFSARSFPFAMRQPPSKSNALGLVKFMFPN
KYNIYLHDTPQKSLFAREVRAFSHGCIRLAQPFEFAYALLAKQEEDPKAFFHRVLNTGKE
TKVDLEQKVPVHLIYRTAYVGPKGEVQYRRDVYGRDRKIWEALQKAGVALPDVQG
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgctttctgttttccgaacccgtaccagtatcctgcttgccgcctgttttgcggccacc
gcgagtatggcaaacaccacttctgaacctgcgcacaacacggcgtttcagatggccgtt
gcagaacataccccacgggaatcgcagatcgcagagttttaccggacaaacgggttttcg
ccgatttgggtgggtgaatccgatgagcatatgcaacgccgggccgcattgatccaggca
ctgtcacatgcgcatctgcacggtctgccgcgggccgatgcgacagtttcatccttgatg
cagaaaatgcaggatgcacgctcgacacgcgaccttggcgccgttgaagcggaactgagc
cgggttttcgtagagtttgccgacgcattgtactcgggttttcttcggcccggaaacatc
gacgacggacttgttcggtcggtggatcgtcgcagcgcggccgagcatctgaacgtcctg
aacacacatggcgccgcgtatcttgcgcaattggctcctcaaacccgtcagtaccgggct
ctgatgaagcagaaactggcgctacaggatttggtagatcaaggcggttggggggcgact
gtcccggaaaccaagctggaatacggtgataccgggcccaatgtcgtgaagcttcgcaat
cggctggcgttgatgggctacatgaaaccatcggccagcccgtctttcgacgccgcgctg
ctggaaggtgtcagggcctttcaaatcgcgcatggattggaacccgatggcgttgcaggt
aagggcacgattgccgagttgaatcgcccggccgtggaccggctcaaggctgtttatgtc
gctctggaacgggaacgctggttgcctcgggaacgcggcgcgcgtcatattcttgtcaac
cagacagatttttcggcaaagatcgtggatgacgggcaagtcacgttcgagacccgtgcg
gtgatcggcaaaaacacgcatgatcgccgcagcccagagttctcggatgtgatggaacat
atggtgataaaccccagttggtatgttccgcgctcgatcatcaccaaggaatacctgcca
aagttgaaagcgaaccccaacgcggtcagtcatatccagatcacggacagcagggggcgg
caggtcaatcgcggggcggttgatttcaatcagttctccgcgcgaagctttccttttgcg
atgcgccagccgcccagcaaaagcaatgctttggggctggtcaagttcatgttccccaac
aagtacaatatctatctgcatgatacgcctcagaaaagcctgttcgcgcgtgaggttcgg
gcgttctcgcacggctgcatccgactggcacagcctttcgaatttgcctatgcattgttg
gccaaacaggaagaggaccccaaggcattctttcatcgtgttctgaacacgggaaaggaa
accaaggttgatttggaacaaaaagttccggtccacctgatttatcgaacggcatatgtc
ggtccaaaaggcgaggtgcagtatcgccgcgatgtctatggccgggaccgcaagatttgg
gaagccctgcaaaaggcaggggtggccctgccggacgttcagggttaa
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