KEGG   Ruegeria sp. THAF33: FIU92_08325
Entry
FIU92_08325       CDS       T06269                                 
Symbol
rnd1
Name
(GenBank) Ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
rut  Ruegeria sp. THAF33
Brite
KEGG Orthology (KO) [BR:rut00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rut03016]
    FIU92_08325 (rnd1)
Enzymes [BR:rut01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     FIU92_08325 (rnd1)
Transfer RNA biogenesis [BR:rut03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    FIU92_08325 (rnd1)
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC
Other DBs
NCBI-ProteinID: QFT73029
LinkDB
Position
complement(1640212..1641369)
AA seq 385 aa
MKTLTTTQELADFCKAAEGYPYITVDTEFLRERTYYSKLCLVQLAVPSEDEDSAVLVDPL
ADGLSLDPLYDLFRNESVVKVFHAARQDLEIFWVEAGVFPKPLFDTQVAAMVCGFGEQVG
YETLVRKICKQGVDKTSRFTDWSRRPLTDAQKNYALADVTHLRGIYERLAAELEKTQRSH
WVAEELRTLTQPATYDIRPEDAWKRVKTRTNSAKFLAVVRELAQFRESYAQENNVPRNRV
FKDDALIELASTKPKTHSDLGGSRLLLREARKGAIAEGILAAVKRGVNCPPDKLPKVDTS
RDKLKVNPALADLLRVLLKSKTESSGVAAKLIATSSDLDQIAAGERDVPALSGWRFEVFG
EDALKLCEGKIALAAKGQSVKVVSL
NT seq 1158 nt   +upstreamnt  +downstreamnt
atgaaaaccctgacgacgacgcaagagctggccgatttctgcaaggccgccgaaggctat
ccctatatcacggtcgacaccgaatttctgcgcgagcggacgtattactccaagctgtgc
ttggtgcaattggctgtcccgtccgaggatgaagacagcgcggttctggtcgatccgctt
gccgatggtttgtcgcttgacccgctttacgatcttttccggaatgaaagcgtggtcaag
gtgttccatgccgcccgccaggaccttgagatcttctgggtcgaagccggcgtgtttccc
aagccgctgtttgacacacaggtcgcagcgatggtgtgtggctttggcgaacaggttggc
tatgaaactctggttcggaaaatctgcaagcagggcgtcgacaagacctctcggttcacc
gactggtcccggcgcccgctgaccgatgctcagaaaaactatgctcttgcagatgtgacc
catttgcgcgggatctacgagcgtctggccgcagaacttgaaaagacgcagcgcagccac
tgggttgccgaagaactgcggacgctgacacagcctgccacttatgacatccggcctgaa
gacgcatggaagcgggtaaagacgcgcacgaactcggccaagtttctggctgtggtgcgg
gaattggcgcagtttcgcgaatcctatgcgcaggaaaacaacgtgccccggaaccgcgta
ttcaaagacgacgcgctgatcgagctggcatcgaccaaacccaaaacacattcggatttg
ggcggatcccgcctgttgctgcgcgaagcccgcaaaggggcgatcgccgaaggtattctg
gcagcggtcaagcgtggcgtgaattgcccgcccgacaaattgcccaaggtcgacacttcg
cgcgacaagctcaaggtcaatccggcgctggctgacctgctgagggttctgctaaagtcc
aaaaccgaaagttcaggtgtggcggcgaaattgatcgccacaagttcggacctggatcag
attgcggccggcgagcgggatgttccagccttgtcgggatggcggttcgaagtctttggc
gaggatgctctcaagttgtgcgaaggaaagattgccctggcggccaaagggcagtcggtc
aaggtcgtgtccctgtaa

DBGET integrated database retrieval system