Ruegeria sp. THAF33: FIU92_08405
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Entry
FIU92_08405 CDS
T06269
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rut
Ruegeria sp. THAF33
Brite
KEGG Orthology (KO) [BR:
rut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rut03032
]
FIU92_08405 (gyrA)
03400 DNA repair and recombination proteins [BR:
rut03400
]
FIU92_08405 (gyrA)
Enzymes [BR:
rut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
FIU92_08405 (gyrA)
DNA replication proteins [BR:
rut03032
]
Prokaryotic type
DNA Topoisomerases
FIU92_08405 (gyrA)
DNA repair and recombination proteins [BR:
rut03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FIU92_08405 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QFT73042
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Position
1654580..1657276
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AA seq
898 aa
AA seq
DB search
MDETPPERPVYDGPTVSIESEMRTSYLDYAMSVIVSRAIPDLRDGLKPVHRRILYAMHET
GNTHDKAYRKSARPVGDVMGKYHPHGDSAIYDALVRMAQDFSMSLPLLDGQGNFGSMDGD
NPAAMRYTEVRMDKPAAALLADIEKETVDFQDNYDGKDKEPTVLPARFPNMLVNGAGGIA
VGMATNIPPHNLGEVVNATLALIDDPDLTSEQLIEYVPGPDFPTGGVMLGRSGARKAYLE
GRGSVIIRAKTRVEELRKDRYAIIVDEIPYQVNKASMIEKIAEAVREKRIEGVSHVQDES
DRNGVRVVVELKRDATPEVVLNQLYRFTPMQTSFGCNMLALNGGRPEQLTLRRFLTSFID
FREDVVARRTAFDLRKARERSHILCGLAVAVSNVDEVVATIRSSADAAEAREKLMTRRWP
AADIADYLRLIDDPLSKMNDDGTYNLTEVQARAILDLRLQRLTQLGVKEVTDELEDLAAK
IKEYLDILSSRERIMGIIADELRSVREQFAVPRRTEIVDWSGDMEDEDLIEREDMVVTVT
SGGYIKRTPLADFRAQKRGGKGLSGMQTKEEDVVTTLFVANTHTQLLFFTTDGMVYKLKT
WRLPQSGRTGKGKAIVNILPIPTGVSIAAIMPVDVPDEEWENLQIVFATSAGDVRRNALS
DFTNVKRNGKIAMDLPEGVELVNARICSDDDDVMLVTNSGRAIRFSTTDVRVFKGRKSTG
VRGIRLNAGDRVVSMSVIRHFEATPDERAAYLKMRRLMAGVTDDTEADEDGGNADSILPQ
ERYAEMSAAENLILTITAKGSGKLSSSHDYPVRGRGGMGVMAMDKAMRGGPLVASFPVEI
DDQIMLATSKGQSIRVPVDGISFRSRSAGGVKVFNTGKGEEVVSVARIADQGDEETEE
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaaccccgcccgagcgccctgtctatgacggcccgacggtctcgatcgaatcc
gagatgcgcacgtcctatctggactatgcgatgtcggtcatcgtcagccgcgcgatcccc
gatctgcgcgacggtttgaaaccggtgcatcggcgcatcctctatgcgatgcacgagacc
ggtaatacccatgacaaggcctatcgcaaatcggcccgtccggtgggtgacgtgatgggt
aagtatcacccccacggcgacagcgcgatctatgatgcgctggtgcggatggcgcaggat
ttttcgatgtcgctgccactgctggatggtcagggcaacttcggctcgatggacggcgac
aacccggcggccatgcgttacaccgaagtgcggatggacaagcccgccgccgccctactg
gcggatatcgagaaagagacggtcgatttccaggacaactacgacggcaaagacaaggaa
cccaccgtcctgcccgcgcggttccccaacatgctggtcaacggcgccggcggtatcgcg
gtgggcatggccaccaacatcccgccgcacaacctgggcgaagtggttaacgcgacgctg
gccctgatcgacgacccggacctgacgtccgagcaactgatcgaatacgtccccggccct
gatttccccaccggcggcgtgatgctgggccgttccggcgcgcgcaaggcgtatctggag
ggccgcggcagcgtcatcatccgcgccaagacccgcgttgaagagctgcgcaaggatcgc
tatgccatcatcgtggacgagatcccctatcaggtgaacaaggcctcgatgatcgagaag
atcgccgaagcggtgcgcgaaaagcgcatcgaaggcgtcagccacgttcaggacgaatcc
gaccgcaacggcgtgcgggtggtggtcgagctgaagcgcgacgcaacgcccgaggtggtg
ctgaaccaactgtaccgctttacgccgatgcaaacctcgttcggctgcaacatgctggcg
ctgaacggcggccgccccgagcagctgactctgcgccgtttcctgaccagcttcatcgat
ttccgcgaagatgtggtcgcccgccgcaccgcctttgacctgcgcaaggcgcgggaacgc
agccatatcctgtgcggtctggccgtggcggtctcgaacgtggacgaggtcgtggccacg
atccggtcttcggccgacgcggccgaggcgcgcgaaaagcttatgacccggcgctggccg
gccgcggacatcgcggattatctgcgcctgatcgacgatccgctgtccaagatgaacgac
gacgggacctataacctgaccgaggttcaggcccgcgccatccttgacctgcgcctgcaa
cgcctgacgcaactgggcgtcaaagaggtcacggacgaactggaagacctggccgcaaag
atcaaggaatacctggatatcctgtcctcgcgcgaacgcataatgggcatcatcgctgat
gaactgcgcagcgtccgcgaacaattcgcggtaccgcgccgcaccgagatcgtcgactgg
tcgggtgacatggaagacgaggacctgatcgagcgcgaagacatggtcgtgaccgtgact
tcgggcggctatatcaagcgcacgccgctggccgatttccgcgcgcaaaagcggggtggc
aaggggctgtcgggcatgcagaccaaggaagaggacgtggtcaccaccctcttcgtggcc
aatacgcacacccagcttctgttcttcaccaccgacgggatggtctacaagctcaagacc
tggcgcctgccccagtcggggcgcaccggcaagggcaaggcgatcgtcaacatcctgccg
attcccaccggcgtttccattgcggcgatcatgccggtcgatgtgccggatgaagaatgg
gaaaaccttcagatcgtcttcgccaccagcgccggcgacgtgcgccgcaacgcgctgagc
gacttcaccaacgtcaagcgcaacggcaagatcgcgatggacctgcccgagggcgtggaa
ctggtcaacgcgcgtatctgctcggacgatgacgatgtgatgctggtcaccaattccggc
cgggcgatccgtttctccacaactgacgtgcgggtgttcaaggggcgcaaatcgaccggc
gtgcggggcatccggctgaacgcgggcgaccgcgtggtctcgatgtcggtgatccgtcat
ttcgaggccaccccggacgagcgcgccgcctatctgaaaatgcgccgcctgatggccggc
gtgaccgacgataccgaagccgacgaggatggcggcaatgccgacagcatcctgccgcag
gaacgctatgccgagatgtcggcggccgagaacctgatcctgaccatcacggccaagggg
tccggcaagctcagctcgtcgcatgactatccggtgcgcggccgtggtggcatgggcgtg
atggcgatggacaaggcgatgcggggcggcccgctggtggcctcgttcccggtcgaaatc
gacgatcagatcatgctggccacctccaagggacagtcgatccgggttccggtcgacggc
atctcgttccggtcccgcagcgccggaggggtcaaggtgttcaacactggcaagggcgaa
gaggtcgtcagcgtcgcccggatcgccgatcagggtgatgaggaaaccgaagaataa
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