Ruegeria sp. THAF33: FIU92_08470
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Entry
FIU92_08470 CDS
T06269
Symbol
oppA1
Name
(GenBank) Periplasmic oligopeptide-binding protein precursor
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rut
Ruegeria sp. THAF33
Pathway
rut02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rut00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FIU92_08470 (oppA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rut02000
]
FIU92_08470 (oppA1)
Transporters [BR:
rut02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
FIU92_08470 (oppA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QFT73055
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Position
1669250..1671067
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AA seq
605 aa
AA seq
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MSPDFLRPFRSLVAGIATIFVISVAHAESSHGIAMYGDPALPPDFVSLPYANPNAPKGGK
AVFGNTGGFNSLNPFLQKGTSPWQLPFWTHESLMGRSWDEPFTLYGLLAESVETDPDRSW
VEFTLREEARFSDGSPVTIDDVIWSYETLGTQGHLRYRGLWGKIDSIEQTGPRSVRITFN
EPDRELALLAGMRPILKKAQWEGKDFADAQLHDVPIGTGPYVIESYEAGRFVNLRRNPDY
WGNDIPFRRGTMNLDELRIEFYGDGSVLFEAFKAGELSAVREFNADKWDTQYNFPAVQRG
DVIKTEIPHGKPSGMTGFVMNTRKAPFDDWRVREALMLAFNFEFINDTVTGGAQPRITSY
FSGSDLAMQPGPAQGQVKDQLLPFADILLPGTLEGYELPKGDGSARNRANLRKAAGLLAE
SGWTVQDGVLRNANGDPFQMTFLLQQGDSEMATVVEIYSRALERLGIRVTTEQVDNAQYV
GRTSELDFDVTTFRRALSLSPGNEQRLYWGSETADAPGTRNLMGVSSPAVDAMIDAMLAS
KTREDFTAATRALDRVLTAGRYVIPIWSFDIGRIAHVKELKHPETLPIYGDGPQYMPEVW
WYDAR
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgagcccggattttctccgtccgtttcgatcacttgtggcgggaatcgccaccattttc
gtgatctctgtcgcccatgcagaatcgtctcatggcatagctatgtatggggacccggcc
ctaccaccggattttgtgtcactcccatacgccaacccgaatgcacccaaaggcggcaaa
gccgtattcggaaacacgggcggttttaacagcctgaacccgtttttgcaaaaaggcacc
tcgccatggcaattgcctttctggacccatgaaagcctgatgggacggtcatgggacgaa
cctttcacactttacgggctgttagccgaatcagttgagaccgatccggaccggtcttgg
gtcgaattcaccctgcgggaggaggcgcggttttccgacggcagtccggtcacgatcgat
gatgttatctggtcttacgaaacgttgggcacgcaggggcatctgcgctatcgcggtctt
tggggcaagatcgacagtatcgaacaaaccggcccgcgttcggtgcggatcacgttcaat
gaacccgaccgagagcttgcgctgctggccgggatgcgcccaatcctgaaaaaggcgcaa
tgggagggcaaggatttcgcggatgcgcaacttcatgatgtaccgattggaaccggcccc
tatgtgatcgaaagctacgaagcgggacgctttgtgaatctgcgacgcaatccggactat
tgggggaacgacatcccgtttcgccgcggcacaatgaaccttgatgagctgcggatcgaa
ttctacggcgacggcagcgtcttgttcgaagctttcaaggccggagagctgtcagccgtg
cgtgaattcaacgccgacaaatgggacacgcaatacaactttcccgccgtgcagcgcggc
gatgtcatcaagaccgaaattccgcatggaaaaccttcgggaatgaccgggttcgtgatg
aacacaagaaaggctccgttcgacgactggcgcgtgcgcgaagcgctgatgcttgcgttc
aacttcgagttcatcaacgacacggtaaccggtggtgcgcaaccaaggattacgtcttat
ttctcggggtccgaccttgcgatgcagcccggcccggcccaggggcaggtaaaagaccag
ttgcttcctttcgctgacatcctgttgcccggcacgctggaagggtatgaactgccgaaa
ggcgacggatcggcccggaaccgggcaaacctccgcaaggccgccggactattggccgag
tcaggctggaccgttcaggatggcgtgctgcgcaatgcaaatggcgatccctttcagatg
actttcctgcttcaacagggtgacagcgagatggcaaccgtggtcgagatctattcccgc
gcgctggaacgtcttggcatccgggtcacgacggaacaggtcgacaatgcccaatatgtc
gggcgcacgtctgaactagactttgacgtcacgacgttccgccgagcgctttccctgtct
cccggcaatgagcagcgtctttattggggcagcgaaactgccgatgcgcccggcactcgc
aacctgatgggcgtatcttcgcccgcagttgatgccatgatcgatgcgatgctggcctca
aaaacccgcgaggactttaccgcggccacccgcgcgctggaccgggtattgacggcaggc
cgctatgtcatcccgatctggagctttgacatcgggcgcatcgcgcatgtcaaagagctt
aagcacccggaaaccctgcctatctatggcgacggtccgcagtacatgcccgaagtctgg
tggtacgacgcccggtaa
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