Ruegeria sp. THAF33: FIU92_09045
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Entry
FIU92_09045 CDS
T06269
Symbol
ihfA
Name
(GenBank) Integration host factor subunit alpha
KO
K04764
integration host factor subunit alpha
Organism
rut
Ruegeria sp. THAF33
Brite
KEGG Orthology (KO) [BR:
rut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rut03032
]
FIU92_09045 (ihfA)
03036 Chromosome and associated proteins [BR:
rut03036
]
FIU92_09045 (ihfA)
03400 DNA repair and recombination proteins [BR:
rut03400
]
FIU92_09045 (ihfA)
DNA replication proteins [BR:
rut03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
FIU92_09045 (ihfA)
Chromosome and associated proteins [BR:
rut03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
FIU92_09045 (ihfA)
DNA repair and recombination proteins [BR:
rut03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
FIU92_09045 (ihfA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_bac_1
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
QFT73170
LinkDB
All DBs
Position
1781679..1781981
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AA seq
100 aa
AA seq
DB search
MGDKTLTRMDLSEAVFREVGLSRNESAQLVESVLNHMSDALVRGEQVKISSFGTFSVRDK
TARVGRNPKTGEEVPIQPRRVLTFRPSHLMKDRVAAGNRK
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacaaaacactgactcgaatggacctgagcgaagccgtctttcgtgaggtaggt
ctgtcaagaaacgaaagtgcgcagctggttgaaagcgttctgaaccacatgtccgacgcc
ttggtgcgtggtgaacaggtgaagatctcgtctttcggtaccttcagtgttcgcgacaag
accgcccgtgtcggtcgcaaccccaaaaccggcgaagaagtcccgattcagccgcgccgt
gtgctgactttccgcccgtcgcatctgatgaaagatcgcgtcgcagccgggaaccgcaag
taa
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