Ruegeria sp. THAF33: FIU92_10905 Help Entry FIU92_10905       CDS       T06269                                  Symbol rnjA Name (GenBank) Ribonuclease J 1   KO K12574   ribonuclease J [EC:3.1.-.-] Organism rut  Ruegeria sp. THAF33 Pathway rut03018   RNA degradation Brite KEGG Orthology (KO) [BR:rut00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     FIU92_10905 (rnjA)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:rut03019]     FIU92_10905 (rnjA) Messenger RNA biogenesis [BR:rut03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Ribonucreases      FIU92_10905 (rnjA) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNase_J_b_CASP RNase_J_C Lactamase_B_2 Lactamase_B RMMBL Anti-Pycsar_Apyc1 Lactamase_B_6 Motif Other DBs NCBI-ProteinID:  QFT73540 LinkDB All DBs Position complement(2157005..2158672) Genome browser AA seq 555 aa AA seqDB search MSSERLIYLPLGGAGEIGMNAYVYGYGEPGKERLILVDLGVTFPDMDTTPGVDLIYADIS WLKERADRLDGVFITHAHEDHVGAVAHCYEALGAPVYARAFTANIARRKMEEHAHPTEAV TTVSAWPEQVSVGPFTVGFLPVSHSIPESAALVIDTPAGRVVHSGDFKLDAAPVVGEAFD PDLWAEVAKPGIKALVCDSTNVFSTHPGRSESEVGPEIVKLVEGAEGMVVATTFASNVAR VKTLAEAGARAGRSVVLLGRAMRRMIEAATETGILADFPKVISAEEALDLPRQNLMLIVT GSQGERRAASAQLARGKYRGLELAEGDLFLFSSKTIPGNERGVIFIMNQLSEKGVDVVDD SSGLYHVSGHANRPDLEKVHALTDPQFVIPMHGEHRHLREHVKLAEQGGRTGVLAVNGTM LDLSGNAPVVVDYVETGRTYLDGTVKIGALDGVVRDRIRMALNGHVTVTVVLDEEDEPLG EPWCDTMGLPETGTSRAALVEVLEEDLNQFLMRAAAKTLRDDDKLEEEMRRIVRQTAKAE IGKKPEVTVVVSRMR NT seq 1668 nt NT seq  +upstreamnt  +downstreamnt atgagcagtgaaagattgatctacctgccgctgggtggcgcgggcgaaattggcatgaac gcctatgtgtacggctacggtgaaccgggaaaggaacgcctgattctggtggatctgggc gtcacttttcctgatatggacacaacgccgggcgttgacctcatctatgccgatatctct tggctgaaagagcgtgccgaccggctggatggtgttttcatcacgcacgcccatgaagac catgtcggcgccgtggcccattgttatgaagccttgggtgcgccggtctatgcgcgtgcc ttcacggccaatatcgcgcgccgcaagatggaagaacacgcacacccgaccgaggcggtc acgaccgtttccgcctggcctgaacaggtgtccgtcgggccgttcacggttggcttcctt cctgtttcgcactcgattcccgaaagtgccgcattggtcatcgacacccccgcagggcgt gtcgtgcattcgggcgacttcaagctggatgctgctccggtcgttggagaggcctttgac cctgacctgtgggccgaggtcgccaagcccggcatcaaggcgctggtctgtgacagtacg aatgtgttttcgacccatccggggcgttcagaatccgaagttggccccgagatcgtcaag ctggtcgaaggcgcggaaggtatggttgtggcgaccacctttgcgtcgaacgttgcgcgg gtcaaaacgctggccgaggcgggtgcgcgggccgggcgttccgtcgtcctgcttgggcgc gcgatgcgtcggatgatcgaagccgcgaccgaaaccggtattcttgcggattttcccaag gtgatcagcgccgaagaggctctggaccttccgcgccagaacctgatgctgatcgtgacc ggcagccagggggaacgacgggccgcaagcgcccaactggcccgtggcaagtaccgtggt ctggagctggccgagggcgatctgttcctgttttcctcgaaaaccattcccgggaacgag cggggcgtgatctttatcatgaaccagctcagcgaaaagggcgtggatgtcgtcgatgac agttcgggcctttatcatgtctcgggccatgcgaaccggccggacctcgagaaagtgcac gcactgaccgatccgcaattcgtgatcccgatgcatggcgaacaccggcacctgcgcgag catgtcaaactggcagagcagggtggcagaaccggagtgctggcggtgaacggcaccatg ctggatctcagcggcaatgcgcctgtggtcgtcgattatgttgaaaccggtcgcacatat ctggacggcaccgtgaagatcggcgcccttgacggcgtggtgcgggatcgtatccgcatg gctttgaacggccatgttacggtgacggtggttctggacgaagaagacgaaccgctgggc gagccgtggtgcgacaccatggggctgcccgaaactggcacgtcccgtgccgcgttggtc gaagtgctggaagaggatctgaaccagttcctgatgcgggccgccgccaagaccctgcgc gatgacgacaagctggaagaagaaatgcgccgcatcgtgcggcagacagccaaagccgaa attggcaaaaagcccgaagtgacggtggtggtcagccggatgcggtga

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