Ruegeria sp. THAF33: FIU92_11470
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Entry
FIU92_11470 CDS
T06269
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rut
Ruegeria sp. THAF33
Pathway
rut03420
Nucleotide excision repair
rut03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FIU92_11470 (pcrA)
03430 Mismatch repair
FIU92_11470 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rut03400
]
FIU92_11470 (pcrA)
Enzymes [BR:
rut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FIU92_11470 (pcrA)
DNA repair and recombination proteins [BR:
rut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FIU92_11470 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
FIU92_11470 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QFT73653
LinkDB
All DBs
Position
complement(2274621..2277014)
Genome browser
AA seq
797 aa
AA seq
DB search
MSSFDEMDAFEGASLSARAMAVRPSPYLDDLNPAQRDAVERLDGPVLMLAGAGTGKTKAL
TTRIAHLLNTARARPNEILSVTFTNKAAREMKERVGRLLGQPAEGMPWLGTFHSICVKLL
RRHAELVDLKSNFTILDTDDQLRLLKQLVQAANIDDKRWPARMLLGIIDDWKNRALTPDK
VPAADAGAYDSKGIELYAQYQTRLRELNAVDFGDLLLHMVTIFQAHQDVLQQYQRWFRYI
LVDEYQDTNIAQYLWLRLLAGGHKNICCVGDDDQSIYGWRGAEVGNILRFEKDFPGAYVV
RLEQNYRSTPHILAAASNVIRGNENRLGKELWTEAEEGHKINLIGHWDGEEEARWIGEEI
DAMQGGTRGIRPMNLDEIAILVRASHQMRAFEDRFLTIGLPYKVIGGPRFYERMEIRDAM
AYFRLVVSPEDDLAFERIVNTPKRGLGDKAQQTIQMTARENGVSLVEGARIAVDNGLING
KGGKALRELIDGLARWNAMTRGPRIEVDDDSVIDDGSLMRFGAPEHTHIELAQIILDESG
YTAHWQNDKTPEAPGRLENLKELVNQLDNFENLQGFLEHVSLVMDNEQDSDGAKVSIMTL
HAAKGLEFPAVFLPGWEDGLFPSQRSMDESGLKGLEEERRLAYVGITRAEEVCTISFAAN
RRVFGQWQNSMPSRFIDELPEDHVEVLTPPGLYGGGQPAAGIETRAAEANVYNSPGWRRM
QARQGQYGMSQPRESRNTVIDATAVASFTLGERVFHQKFGYGAVVGIEGDKVEVEFDKAG
TKKVVSRFLTNKDDVPF
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgagcagttttgacgaaatggacgccttcgagggcgcatcgctgtcggcgcgggccatg
gccgtgcgcccttcgccctatctggatgatctgaacccggcacaacgggacgcggtcgag
cgtctggacggaccggttctgatgctggcaggtgccgggacgggcaagaccaaggctctg
accacccggatcgcgcatcttctcaacactgcgcgcgcacgtccgaatgagattctgtcg
gtaaccttcaccaacaaggccgcgcgcgagatgaaggaacgggtgggccgcctgttgggg
cagcctgctgaggggatgccatggctgggtacctttcattcgatctgcgtcaaactgctg
cgccgccatgcggaactggtcgatttgaaatcgaacttcaccattctggataccgacgac
cagttgcgcctgctcaagcagttggtgcaggccgcaaatatcgacgacaaacgctggcct
gcgcggatgttgctgggaatcatcgacgattggaagaaccgtgcgctgacgcccgacaag
gtgccagccgccgatgccggggcttatgacagcaagggcattgagttgtatgctcaatat
cagacccgcctgcgcgaattgaatgcggtggatttcggcgatctgcttctgcacatggtt
acgatcttccaggcccatcaggatgttctgcagcaataccagcgctggttccgctatatc
ctggtggacgagtatcaggacaccaacatcgcccaatatctgtggctgcggctgctggcg
ggcgggcacaagaacatctgctgcgtcggcgatgacgatcagtcgatctatggctggcgc
ggggccgaggtgggcaacatcctgcggttcgaaaaggactttcccggcgcgtatgtggtg
cggctggaacagaactaccgctcgaccccgcatattctggcggctgcgtcgaacgtcatt
cgcggcaatgaaaaccgcctgggcaaagagctgtggaccgaagccgaggaaggccacaag
atcaatctgatcggccattgggatggcgaggaagaggcccgctggatcggcgaggagatc
gacgcgatgcagggcggtacgcgcggtattcgcccgatgaaccttgatgagatcgcgatc
ctcgtgcgcgccagccaccagatgcgcgccttcgaagacaggtttctgaccatcggtcta
ccctacaaggtgatcggcggcccgcgcttttatgagcggatggagattcgcgatgccatg
gcctatttccggctggtggtcagccccgaggatgatcttgcgtttgagagaatcgtaaac
acgccgaaacgcggccttggcgacaaggcgcagcaaaccatccagatgaccgcgcgcgaa
aatggggtgtcactggtcgaaggggctcggattgcggtcgacaacgggctgatcaacggc
aagggaggcaaggcgctgcgcgaactgatcgacggtctggcgcgttggaatgcgatgacg
cgtgggccacggatcgaggtggacgacgattcggtgatcgatgacggttcgctcatgcgg
ttcggcgcacccgagcatacgcatatcgaacttgcgcagatcattctcgacgaatccggc
tataccgcccactggcagaacgacaagacacccgaagcgccggggcgccttgaaaacctc
aaggaactggtgaaccagctggacaatttcgagaacctgcaagggtttctggaacatgtc
agtctggtcatggacaacgaacaggacagcgacggcgccaaggtttcgatcatgaccctg
cacgcggccaaggggctggagtttcccgccgtcttcctgccgggctgggaagacgggctg
ttcccctcgcagcggtcaatggacgaatccgggctcaaggggctcgaggaagaacggcgc
ctggcctatgtcggcatcacccgtgccgaagaagtgtgtaccatttcttttgccgccaac
cggcgggtgttcgggcagtggcagaactccatgccgtcccggttcatcgacgaattgccg
gaagatcacgttgaggtccttacgcctccgggtctctatggtggcggccagcccgctgcg
ggcattgaaacccgtgcggccgaagcgaatgtctacaactcgccgggctggaggcggatg
caggcgcgccaggggcaatacggcatgtcgcagccgcgcgaatcccgcaacacggtgatc
gacgcgaccgccgtggccagtttcacgctgggggaacgggtgttccaccagaaattcggc
tatggcgcggttgtcgggatcgagggcgacaaggtcgaagtcgaattcgacaaggcaggc
acaaagaaagtggtctcgcgttttctgaccaacaaggatgacgtcccgttctga
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