Ruegeria sp. THAF33: FIU92_13875
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Entry
FIU92_13875 CDS
T06269
Symbol
lysS
Name
(GenBank) Lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
rut
Ruegeria sp. THAF33
Pathway
rut00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rut00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FIU92_13875 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rut01007
]
FIU92_13875 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rut03016
]
FIU92_13875 (lysS)
Enzymes [BR:
rut01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
FIU92_13875 (lysS)
Amino acid related enzymes [BR:
rut01007
]
Aminoacyl-tRNA synthetase
Class I (A)
FIU92_13875 (lysS)
Transfer RNA biogenesis [BR:
rut03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
FIU92_13875 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1g
tRNA-synt_1c
tRNA-synt_1e
Anticodon_2
tRNA-synt_1
tRNA-synt_1b
DUF5372
Motif
Other DBs
NCBI-ProteinID:
QFT74122
LinkDB
All DBs
Position
complement(2739495..2741069)
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AA seq
524 aa
AA seq
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MSELRETAMSSKAWPFEEARRLLKRYQKGAPEKGYVLFETGYGPSGLPHIGTFGEVARTT
MVKRAFEALSDIPTKLICFSDDLDGMRKVPSNVPNPEALEEHLQRPLTSVPDPFGEYPSF
GEHNNAMLRRFLDTFGFDYEFYSARDFYRSGQFDEILKRAVHKYDDVMAIMLKSLREERQ
RTYSIFLPIHPETGRVLYVPMKKVCAETYTVTFDDEDGKEWTVPVTGGNVKLQWKPDFGA
RWAALGVDFEMYGKEHATNEKIYDAICRALGGRAPEHFSYELFLDENGQKISKSSGNGVS
IDEWLTYAPTESLAYFMYQKPKTAKRMHFDVIPKAYDEYHQQLRAYPGQDLKAQLNNPVW
HIHGGDVPESTLIVPFAMLLNLASVSGAEDKETLWGFIRRYAPEATAESHPDLDQAAGFA
VRYFNDFAKPTRKHRSPTDQEREALEALKAALEAYDGPTEDEALQSVVYSIGRERFDPMR
GWFTALYEVLLGASQGPRFGGFIALYGVPETISLIDKALAGELV
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaactgcgtgaaaccgcgatgtcgtccaaggcctggccttttgaagaggcgcgc
cggttgctcaaacgctatcagaagggcgctccggaaaaggggtatgtgctgttcgaaacc
ggttacggcccgtctggcttgccgcatatcggaacattcggcgaggtcgcgcggaccacg
atggtcaagcgcgcgttcgaggcgctttcggacataccgaccaagctgatctgtttttcg
gacgatctggacgggatgcgcaaagtgcccagcaacgtgcccaacccggaggcgcttgaa
gaacatttgcagcgcccgttgacttcggttcccgatccatttggcgaataccccagcttc
ggcgagcacaacaacgcgatgttgcgccggttcctcgataccttcggattcgactatgag
ttctattctgcacgcgatttctatcggtcaggccagttcgacgagatcctgaagcgcgcg
gtccacaagtatgatgacgtgatggccatcatgctcaaaagcctgcgggaagagcgccaa
cggacctattcgattttcctgccgatccatccggaaaccgggcgggttctgtatgtgccg
atgaagaaagtgtgtgcagagacctataccgtcacattcgatgacgaggacggcaaggaa
tggaccgtgcccgtcactggcggcaacgtgaaattgcaatggaagcctgatttcggggcg
cgctgggcagcgctgggcgtcgatttcgagatgtacggcaaggaacatgctaccaacgaa
aagatctatgacgcgatctgccgtgcattgggcggccgtgcgcccgagcatttttcctat
gagctgttcctggatgagaatggccagaagatctcgaaatcgtccggcaatggcgtgtcg
atcgacgaatggctgacctacgcgccgaccgaaagcctggcgtatttcatgtatcaaaag
cccaagacagccaagcggatgcacttcgacgtgatcccgaaggcttatgacgaatatcat
caacagttgcgcgcctatccggggcaggacctaaaagctcagctgaacaatccggtctgg
cacattcacggtggcgacgttcccgaatcgaccctgatcgtaccgtttgcgatgttgctg
aacctggcgtcggtttcgggcgcggaagacaaggagacgctgtggggctttattcgccgc
tatgcgccggaagcaacggctgaaagccatcccgatctggatcaggccgcgggctttgcg
gttcgctacttcaacgatttcgccaaaccaacgcgcaaacatcgctcacccacggatcag
gagcgtgaggcgctggaagcgctgaaagccgcgcttgaggcttatgatggcccgaccgag
gacgaggcgctgcaatcagtggtctattccatcgggcgtgagcggttcgaccccatgcgc
ggttggttcacggcgttgtacgaagtgcttctgggtgcatcgcagggcccgcgttttggc
ggctttatcgcgctgtacggtgtgcctgaaacaatttccctgatcgacaaggcgctggcc
ggagagctggtctga
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