Ruegeria sp. THAF33: FIU92_14345
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Entry
FIU92_14345 CDS
T06269
Symbol
gabR
Name
(GenBank) HTH-type transcriptional regulatory protein GabR
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
rut
Ruegeria sp. THAF33
Brite
KEGG Orthology (KO) [BR:
rut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rut03000
]
FIU92_14345 (gabR)
Transcription factors [BR:
rut03000
]
Prokaryotic type
Helix-turn-helix
GntR family
FIU92_14345 (gabR)
SSDB
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Paralog
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_50
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
QFT74215
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Position
2824699..2826159
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AA seq
486 aa
AA seq
DB search
MGISVDTFFLELNGQGTLQAQIQQMIAEGILSGRFHVGEKLPSSRKLAAHLGVSRITVTL
AYTELLANDYLTAKGRSGYYVSQNAPVPPKYSPVQRGTESVDWDNALARRFLDSDVLPKP
SDWREYRYPFIYGQADRTLFDHANWRLCAVRALGHKDFDSLTGDYVDQDDPLLIEFIARH
TLPRRGIAARPEEILITLGAQNALWLASRILLTHNRTAVIEDPCYYALRSLLNHWDCAVT
PLSVDRDGLPPEAIPDEADVIFTTPSHQSPTTATMPIDRRNQLLDRARDLDAMVVEDDYE
FEMAFRGAPSPALKSMDRDGRVIYVGSFSKSLFPGLRLGYMVGSEPFIREARALRSLVLR
HPPGHIQRTAAYFLSLGHYDAQIRRMSKALQERRDAMDEAIAESGLTVAGRGVIGGSSMW
MSAPEHIDTTQLALRLQNQSVHIEPGAPFFSGPDRPQNFYRLGYSSIPTDRIAPGVKLIA
DAIRAV
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggggatttcggtcgatacattctttcttgagctcaatggtcagggcacattgcaggcc
cagatccagcagatgattgccgaaggcatcttgtccggtcgctttcacgtcggagaaaaa
ctcccttcgtcacgcaaactggccgcgcatctgggtgtcagccgaataacggtgacgttg
gcctacaccgaacttttggccaatgactacctgacggccaaggggcggtccgggtattac
gtttcgcaaaacgcacctgtcccccccaagtattcgcctgtccagcgcggcacagaatcc
gttgactgggacaatgcactggcgcgccgctttctggacagtgacgttctgccaaaaccc
agcgactggcgagagtaccgttatccgttcatctacgggcaggctgaccgaaccttgttt
gaccacgccaactggaggttatgcgccgtccgcgcgttgggacacaaggatttcgattcg
ctgaccggagattacgtggatcaagatgatccgttgttgatcgaatttattgcccgtcac
actctacctcgacgtggcatcgcggcccgccccgaagagatcctgatcactctgggcgcg
cagaacgcgctctggctggcatcgcgcatcttgctgacccacaatcgcacggccgtcata
gaagacccatgttactatgcgctgcgaagccttctgaaccattgggattgcgcggtcacg
cccttgagcgtggaccgggacgggctgcctcccgaggcgattcccgacgaagcggacgtc
atctttaccacccccagccatcaaagcccgacaaccgcaacgatgccgatcgaccgccgc
aaccaattgctggaccgagcacgcgatctggatgcgatggttgtcgaggatgactatgag
tttgaaatggccttccgaggcgccccttcgccggcgctgaaatccatggatcgggatggg
cgcgtgatttatgtcggcagtttttccaagtcgctgtttccaggattgcgacttgggtac
atggtcggctcagagccatttatccgcgaggcgcgcgcgctgcgctcgttggttctgcgc
cacccgccaggccacattcagcgcacggcggcgtatttcctgtcgttgggccattacgac
gcgcaaattcggcgtatgtcgaaggccttgcaagaacggcgcgacgcgatggacgaagcc
atcgcggaaagtgggctgaccgtggctggacggggtgtgattggcggctcttcaatgtgg
atgtcagcccctgagcacatcgacacaactcaactggcattaaggctgcaaaaccagagt
gttcacattgagccgggcgcaccgttcttctcggggcccgacaggccacagaatttctat
cgcttgggctattcctccattccaacagaccgcatcgcgcccggcgtgaaactgatcgcc
gacgcaattcgggccgtttga
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