KEGG   Ruegeria sp. THAF33: FIU92_15185
Entry
FIU92_15185       CDS       T06269                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
rut  Ruegeria sp. THAF33
Brite
KEGG Orthology (KO) [BR:rut00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rut03016]
    FIU92_15185 (truB)
Enzymes [BR:rut01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     FIU92_15185 (truB)
Transfer RNA biogenesis [BR:rut03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    FIU92_15185 (truB)
 Prokaryotic type
    FIU92_15185 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2 Tim44
Other DBs
NCBI-ProteinID: QFT74383
LinkDB
Position
2989759..2990664
AA seq 301 aa
MGRKRKGRDISGWLVVDKPAGMTSTAVVNKVRWAMDAKKAGHAGTLDPEATGVLAVALGE
ATKTVPYITDALKAYTFTVRLGQATNTDDAEGEVIAESDARPSDEDIKRALTPFLGDIMQ
VPPKFSAVKIDGQRAYKLARDGEDVELTARPLWVEELILVDRPDPDHVVLEMTCGKGGYV
RSIARDLGEALGCHGHVRELRRIWSGPFEAEDGLSIEQIDEMAKTTALDDYLHPLEAGLS
DLPELKCTPEGATRLRNGNPGMVLAADVEYGDEAWASLDGKAVAVGVYKSGELHPSRVFA
A
NT seq 906 nt   +upstreamnt  +downstreamnt
atgggacgcaaacgcaagggtcgcgacatttccggctggctggtggtggacaaacccgcg
ggcatgacgtcgaccgctgtggtcaacaaggtgcgctgggcgatggatgccaaaaaggcg
ggccatgcgggcacgcttgaccccgaagcgaccggcgttctggccgtggctctgggtgag
gcgaccaaaaccgttccctacatcacggatgctttgaaagcctacaccttcactgtccgt
ctgggccaggccaccaacactgacgatgccgagggcgaagtgattgccgaaagcgatgcc
cgcccgtcagacgaagacatcaagcgggcgttgaccccgtttctgggcgacatcatgcag
gttccgcccaagttttccgccgtgaaaatcgacggccagcgcgcctataaactggcccgc
gacggcgaagacgtggaactgacagcccggcctctttgggtcgaggaactgatccttgtc
gaccgccccgacccggatcacgtggtgttggagatgacctgcggcaagggcggttatgtc
cgctcgatcgcccgcgatctgggtgaagcgctgggatgccacggccacgtccgggaactg
cgccggatctggtccggaccgttcgaggccgaagacgggttgagcatcgaacagatcgac
gaaatggcaaagaccacggcgctggacgactatctgcacccgctggaagccggcctgtcc
gacctgccagagctcaaatgcacccccgaaggcgcaacccgcctgcgcaacggcaacccg
ggcatggtgttggccgcggatgttgaatacggcgacgaggcatgggcctcgctggatggc
aaggccgtggccgtgggggtttacaaatcgggcgaattgcatcccagccgggtgttcgcc
gcctga

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