Ruegeria sp. THAF33: FIU92_15605
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Entry
FIU92_15605 CDS
T06269
Symbol
recQ2
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rut
Ruegeria sp. THAF33
Pathway
rut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FIU92_15605 (recQ2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rut03019
]
FIU92_15605 (recQ2)
03400 DNA repair and recombination proteins [BR:
rut03400
]
FIU92_15605 (recQ2)
Enzymes [BR:
rut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FIU92_15605 (recQ2)
Messenger RNA biogenesis [BR:
rut03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FIU92_15605 (recQ2)
DNA repair and recombination proteins [BR:
rut03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FIU92_15605 (recQ2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
Cas3-like_C_2
Rhodanese
ResIII
Motif
Other DBs
NCBI-ProteinID:
QFT74467
LinkDB
All DBs
Position
3065069..3067108
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AA seq
679 aa
AA seq
DB search
MFDAAPLLRDVFGFDEFRPGQEEIVDAVTAGQNVLAIMPTGGGKSLCYQLPALLRDGVTV
VISPLIALMRDQVRGLQEAGVEAGALTSGNTPEETDAVWAALEAGRLKLLYMAPERLAAG
SALGVLRRINVSLIAVDEAHCVSQWGHDFRPDYLRIGELRRALNVPLAAFTATADAETQD
EIVEKLFDGTPPRKFLRGFDRPNIHLAFAAKDSPRRQILDFADAHRGQSGIIYCGTRNKT
EVLAQALREQGHSACHYHGGMEAEDRRIVETRFAREDGLIVVATVAFGMGIDKPDIRWVA
HADLPKSIEAYYQEIGRAGRDGGPAETLTLFGPDDIRLRRSQIDEGLAPPERRMADHARL
NALLGLAEALHCRRQTLLGYFGEQAAPCGKCDLCDTPPEVFDGTTPVRMALSAILRTEEW
FGSGHLIDILLGNETDKIRARRHDGLSTWGIGKDWSRAQWQAIFRQMMGHDLVRPDPERH
GALRMTEAAKPILKGEAKINLRKDALRKATRRPAVKAMVSDEDAPLLSALKAKRRALAES
ARVPAYVIFPDRTLIEMAEKRPMTLDEMARIGGVGAKKLERYGDTFLEVIAGEAQALHPA
RRKLAGRDQGDIFDRLLEVQSQLSRGPDGIDKPLTCSASQLAKVAQMRPDDLRGLEQVLG
DRRHERFGTAFLDVLREAG
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacgccgcgcctctgctgcgagatgtctttggattcgatgaattccgccccggg
caggaagagatcgtcgatgccgtaaccgccggccagaacgtgctggccatcatgcccacg
ggcggcggcaaatccctgtgttatcaactgcctgccctgctgcgcgacggggtcacggtg
gtgatctcgccgctgatcgccctgatgcgcgatcaggtgcgggggctgcaagaagccggg
gtcgaagccggcgcgctgacctcgggcaacacccccgaggaaacagatgccgtgtgggcg
gcgctcgaagccgggcggctgaaactgctttacatggcgcccgaacggctggccgccggg
tcggcactgggcgtgttgcgtcggatcaatgtcagcctgatcgcggtggacgaggcccat
tgcgtcagccagtggggccatgatttccgccctgattatttacggatcggagagttgcgg
cgcgcgctgaacgtgcccttggccgccttcaccgccacggcggatgcggaaacccaggac
gaaatcgtcgagaaactgttcgacggcacacccccgcgcaagtttctgcggggcttcgac
cggccgaatatccacctggcctttgccgccaaggacagcccgcgcaggcagatcctggat
ttcgcggacgcccaccgaggccagtcgggcatcatttattgcggcacccgcaacaagacc
gaagttctggcgcaggcgctgcgcgaacagggccacagcgcctgccactatcacggcggg
atggaggccgaggaccgccgcatcgtcgaaacccgcttcgcgcgcgaggacgggctgatc
gtggtggccaccgtggccttcggcatgggcatcgacaagcccgacattcgctgggtcgcc
catgcggacctgccgaaatccatcgaggcctattaccaggaaatcggccgcgccgggcgc
gacggcgggccggctgagaccctgactctgttcggccccgacgatatacgtttgcggcgg
tcccagattgacgaggggctggcaccacccgaacgccgcatggcggaccatgcgcggctg
aacgcgctgctggggttggccgaggcgctgcactgccgccgccagaccctgctgggctat
ttcggggaacaggccgcaccctgcggcaaatgcgacctgtgcgatacaccgcccgaagta
tttgatggaacaacacccgtccgaatggccttgtccgcgattcttcgcaccgaggaatgg
tttggcagcggtcatctgatcgacatccttctggggaacgagaccgacaagatccgcgcc
cgtcgtcatgatggtctgtccacctggggcatcggcaaggactggtcgcgcgcgcaatgg
caggcgatattccgccagatgatggggcacgatctggtgcgccccgaccccgaacgccac
ggggccttgcgcatgaccgaggccgccaaacctattctcaagggcgaggcaaagatcaat
ctgcgcaaggacgccctgcgcaaggcaacccgtcgccccgccgtgaaagccatggtgtcc
gatgaagatgcgcccttgctgtcggctctcaaggccaaaagacgcgctttggcagaatcc
gcccgggtcccggcctatgtcatttttccggatcgcaccctgatcgaaatggcggaaaag
cgccccatgacgctggacgagatggcccggattggcggcgtcggcgccaagaagctggaa
cggtatggcgacaccttccttgaagtgatcgcgggcgaggcccaggcgttgcacccggcg
cgccgcaagctggccggtcgcgatcagggcgacatctttgaccgcttgctggaagtacag
tcccaattgtcccgcggtcccgacgggatagacaagcctctgacctgctcggcctcgcaa
ctggcaaaggtggcacagatgcgcccggatgacctgcgcgggcttgaacaggtgctgggc
gaccggcgtcacgaaaggtttggcaccgcctttctggacgtgctgcgtgaggcgggctag
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