Ruegeria sp. THAF33: FIU92_15625
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Entry
FIU92_15625 CDS
T06269
Symbol
pbpF
Name
(GenBank) Penicillin-binding protein 1F
KO
K05367
penicillin-binding protein 1C [EC:
2.4.99.28
]
Organism
rut
Ruegeria sp. THAF33
Pathway
rut00550
Peptidoglycan biosynthesis
rut01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rut00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FIU92_15625 (pbpF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rut01003
]
FIU92_15625 (pbpF)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rut01011
]
FIU92_15625 (pbpF)
Enzymes [BR:
rut01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
FIU92_15625 (pbpF)
Glycosyltransferases [BR:
rut01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
FIU92_15625 (pbpF)
Peptidoglycan biosynthesis and degradation proteins [BR:
rut01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
FIU92_15625 (pbpF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
BiPBP_C
Motif
Other DBs
NCBI-ProteinID:
QFT74471
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All DBs
Position
3075862..3077877
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AA seq
671 aa
AA seq
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MFALAGALYLTALARDGVDRWVDATTLPSVLAETSVEMRDRNGELLRAFPVEDGIWRLRP
GAVDPDFIAMLIRYEDKRFWTHAGVDLIAMLRAAGQSLWNGRNVSGGSTLTMQVARLIED
GPTGRWSGKFRQIRVALALERRLSKQQILNLYLTHAPYGGNLEGLRAGARAWFGKDATRL
TPAQSALLVALPQSPEARRPDRKPEAARQARDLVLNRLVRHTVLTNAQARAAMTEPLPDR
MNLFPRFAPHLTDRVRLQAPAIQAFDLTLDAGLQARLETLVAQAATRVGPRVSGALIVAD
HRSGEVLASVGSAGYQDARQGFVDMTRAVRSPGSTLKPLVYGLAFDQGLAHPETLISDSP
VMFGRYAPRNFDGAFRGDVRVRDALQLSLNIPVVRLTNELGPARLMTALRLAGSEPRLNG
ATPGLAISLGGVGLSLHDLVQVYTTLAAGGTGPILHHDVLADARRTRRVLSETSAWQVSD
ILAGLAPPAGGATGALAYKTGTSYGHRDAWAIGFDGQHVIGVWLGRADGTPVPGAFGGDL
AAPLLAEAFNLLKPELTPLRPPPPSTLLVGAAQLPQPLQRFRPRTAVFDNDPSAPDLLFP
PDNSVLETFGAPLTVKLRGGVGPFSVLADGVPLLTGQRHREFEIPNPGAGFTSLVVVDAQ
GQSDRASIRID
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
ttgtttgcgctggccggagcactctatctgacggcactggcacgggatggtgttgaccgc
tgggtcgatgccacaacgctgccttccgttctggctgaaacttcggtcgagatgcgggac
cggaatggcgagcttttgcgggcgtttccagtcgaggatggcatctggaggctgcggccc
ggcgcagttgacccggatttcatcgcgatgctgatccggtacgaggataaacggttctgg
acccacgccggagtggacctcatcgcgatgctgcgggctgccgggcaaagcctgtggaac
gggcgtaacgtgtcgggcgggtccaccctgaccatgcaggtggcgcggttgatcgaagat
ggcccaaccgggcgctggagcgggaaatttcgccagatcagagtcgcattggcgttggag
cggcgtctgagcaaacagcaaatcctgaacctttatctgacccatgccccctatggtggc
aatcttgaagggctccgtgccggcgcccgcgcgtggtttggaaaggacgccacgcggctg
acgcccgcgcaaagcgccctgttggttgcgttgccgcaatcccccgaggcccggcgcccg
gatcgcaagccagaggctgcccggcaggcccgcgacctggttctgaacaggctggtgcgc
cacaccgtcctgaccaatgcccaagcgcgtgcggccatgaccgaaccccttccggatcgg
atgaatctgtttccgcgctttgcaccccatctgactgaccgcgtgaggctgcaagcaccc
gcaatccaggccttcgatctgacgctggatgccggattacaggcccggctggaaaccttg
gtggcccaggccgccacccgcgtcggaccacgcgtttccggggctctgatcgtggccgac
catcgcagcggcgaggttctggcatcggttggatctgccgggtaccaagatgcccgtcag
gggttcgtggatatgacccgggccgtacggtcacccggatcgaccctgaaacctctggtc
tacgggctggccttcgatcaggggctggcccatcccgagaccctgatcagcgacagcccc
gtgatgtttggccgatacgcaccgcgcaatttcgacggcgccttccgtggcgatgtccgg
gtgcgggacgccctacagctgtcgctgaacatccccgtagtgcgcctgacgaatgagctg
gggccagctcggttgatgacggctttgcggttggccgggtcagagccacgtctgaatggc
gcaacacccggattggcgatttctttgggtggcgtggggttgagcctgcacgatctggta
caggtttacaccactctggcagctggcggtacaggcccgatcctgcatcatgacgttctg
gcagacgcccggcgcacccggcgcgttctgtcggaaacctcggcctggcaggtttcggac
attctggccgggcttgcgccaccggcaggtggtgcgacaggggcgctggcctacaagacc
ggcacgtcttatggccaccgcgatgcctgggccatcggctttgacgggcagcacgtcata
ggggtctggctgggccgcgccgatggaacgcctgttcccggtgcattcgggggcgacctt
gccgcacccctgttggccgaggctttcaacctgttgaaacccgagctcacgcccctgcgc
ccgccgccgccttcgaccctgctggtgggtgctgctcaattgccccaacccttgcagcgt
ttccgcccccgcacggctgtattcgacaatgacccgtccgcaccagacttgctgtttccg
cccgataattccgtgttagagacgtttggggcacctctgacagtcaaactgcgcgggggt
gtcgggccgttttcagtgctggcagacggtgtacccctgctgaccgggcagcgacaccga
gagttcgaaatcccaaatcccggggccggtttcacttcgcttgtagtggtggatgcgcaa
ggtcaatccgaccgggcatccatccggatcgactaa
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