Ruegeria sp. THAF33: FIU92_15675
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Entry
FIU92_15675 CDS
T06269
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rut
Ruegeria sp. THAF33
Pathway
rut03030
DNA replication
rut03410
Base excision repair
rut03420
Nucleotide excision repair
rut03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FIU92_15675 (polA)
03410 Base excision repair
FIU92_15675 (polA)
03420 Nucleotide excision repair
FIU92_15675 (polA)
03440 Homologous recombination
FIU92_15675 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rut03032
]
FIU92_15675 (polA)
03400 DNA repair and recombination proteins [BR:
rut03400
]
FIU92_15675 (polA)
Enzymes [BR:
rut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FIU92_15675 (polA)
DNA replication proteins [BR:
rut03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FIU92_15675 (polA)
DNA repair and recombination proteins [BR:
rut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FIU92_15675 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FIU92_15675 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
QFT74481
LinkDB
All DBs
Position
complement(3087382..3090180)
Genome browser
AA seq
932 aa
AA seq
DB search
MSNFGKGCHLHLIDGSAFIFRAYHALPPLTRKSDGLPIGAVSGFCNMLQKYVEGNTGPDA
PTHVAVIFDKGSHTFRNDLYDLYKANREAMPEDLRPQIPLTREATKAFNIACKELEGYEA
DDIIATLTVQAREAGGRVTIVSSDKDLMQLVGDGVEMLDAMKNKRIDRDGVIEKFGVAPE
RVVDVQALAGDSVDNVPGAPGIGVKTAALLIKEYGDLETLLDRAEEIKQPKRRQTLIEKR
DQIELSKKLVQLDENTPLDFTLDDLEVREPDAETLLGFLADMEFRTLTKRIADKLGAEAP
AIADAPAPAAKEVEAETIPFDAAKYECVRDAAALQKWIDQAHERGWIAVDTETTGLNEMI
ADLVGISLCVEAGEACYIPLTHRDGAADDLFGSDALAEGQMPLDEALTLLKPVLEDPSII
KIGQNMKYDAKIFRRHGIDVAPIDDTMLMSYAMHGGEHGHGMDTLSERYLGHTPIPIKPL
LGSGKSAITFDKVPIDEATAYAAEDADITLRLWQLFKPQLHRVQVTTVYETLERPLVPVL
AEMEMHGIKVDRDVLSRMSNAFAQKMAGLEAEIHELAGENFNVGSPAQLGEILFDKMGLE
GGKKGKTGKYSTGADILEDLATEHELPRRVLDWRQLSKLKSTYTDALQTHINPDTGRVHT
SYAITGANTGRLASTDPNLQNIPVRTEEGRRIREAFVAEPGNVLVSLDYSQIELRILAHI
ADISTLKQAFADGLDIHAMTASEMFDVPLDEMTPDIRRQAKAINFGVIYGISGFGLARNL
RIPRAEAQGFIDRYFERFPGIRQYMDDTVAFAKEHGYVQTLFGRKIHTPEINAKGPHAGF
SRRAAINAPIQGTAADVIRRAMVRMPGAINGLPAKMLLQVHDELLFEVAEDSVDPLIDVA
REVMEGASDPAVKLDVKLSVDAGQGANWAEAH
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatttcggaaaaggatgtcacctgcatctgatcgacggatcggcctttattttc
agggcctatcacgcgctgcctccgctaacccgcaagtcggatggtctgccgattggggcg
gtgtccgggttctgcaacatgcttcagaaatatgtcgaagggaacaccgggccggatgcg
ccaacccatgtggcggtgattttcgacaaggggtcgcacacattccggaatgatctgtac
gacctgtacaaggccaaccgcgaagcgatgcccgaggacctgcgcccgcaaattccactg
acccgcgaggcgacaaaggcgttcaatatcgcctgcaaggaactcgaaggctatgaggcc
gacgacatcatcgccaccctgaccgtgcaggcgcgcgaggctgggggccgcgtgaccatc
gtaagttccgacaaggatctgatgcagttggtcggtgacggtgtcgagatgctggatgcg
atgaagaacaagcgtatcgaccgggacggggtgatcgagaagtttggagttgctcctgag
cgcgttgtggatgttcaggcgctggcgggggattccgttgacaatgtgccgggtgctccg
ggaatcggggtcaagacggcggcgctgttgatcaaggaatacggtgatctggaaacactg
ctggaccgggccgaggaaatcaaacagcccaagcgccggcagaccctgatcgaaaagcgc
gatcagatcgaactgtcgaagaaactggtacagctggacgagaacacaccgctggatttc
acgctggatgaccttgaagtgagagagcccgatgcagagaccctgctgggttttctggcg
gatatggaattccgcacactgaccaaacggatcgccgacaagctgggggccgaagcaccg
gccatcgccgacgctccggcgcctgcggccaaggaagttgaggccgagacgatcccgttt
gacgcggcaaagtatgaatgtgtccgtgatgcagcggctttgcaaaaatggatcgatcag
gcccatgaacgaggctggatcgctgttgataccgaaaccaccggtctgaatgaaatgatc
gccgatctggtcggtatttcgctgtgtgtcgaggctggcgaagcctgttacatcccgctg
acccaccgtgatggtgcggcggatgatctgttcgggtcggacgcgctggctgaagggcaa
atgcctctggatgaggcgctgacgctgctgaagccggtgcttgaggacccctcgatcatc
aaaatcgggcagaacatgaaatacgatgccaagattttccggcgtcacggtatcgatgtg
gccccgatcgatgatacgatgctgatgtcctatgccatgcatggcggtgagcatgggcac
ggcatggatacgctctcggaacggtatctcggccatacgccgatcccgataaagccgctg
ctggggtcaggcaaatctgcgatcaccttcgacaaggtgccgatcgacgaggccaccgcc
tatgccgccgaggatgcggatataacgctgcgcctgtggcaactgttcaaaccgcagctc
caccgggtgcaggtgacgactgtctacgagacgctcgaacgaccacttgtgccggttctg
gccgagatggagatgcatggcatcaaggtcgaccgcgacgtgctgagccgtatgtcgaac
gcctttgcccagaaaatggccggtttagaggctgaaatccacgagttggcgggtgagaac
ttcaatgtcggctcacccgcgcagttgggtgagatcctgttcgacaagatgggcctggaa
ggtggcaagaagggcaagaccggcaagtactcgaccggggctgatattttggaagatctg
gcgaccgagcatgaactgccgcgcagggtgctggattggcgccagttgtccaagctgaaa
tcaacctataccgacgcgcttcagacccatatcaaccccgacacgggccgggtgcacacg
tcttatgccatcaccggggcgaataccgggcgtctggcctcgaccgaccccaatttgcag
aatatccccgtgcgcaccgaggagggccgccgcatccgcgaggcctttgtcgccgagccg
ggcaatgttctggtcagcctcgactacagccagatcgagctgcgcatcctggcgcatatc
gccgacatttcgaccctgaaacaggcctttgccgacgggctggacatccacgccatgacc
gcgtcggaaatgttcgacgtgccgctggacgagatgacgccggacatccgccgtcaggcc
aaggcgatcaactttggtgtgatctatggcatctcgggcttcggactggcgcgcaacctg
cgcatcccgcgggccgaggcacagggtttcatcgaccgctatttcgaacgctttccgggc
attcgccagtatatggatgacacggtggcatttgccaaagagcacggctatgtccaaact
ctgttcgggcgcaagatccacacgcccgaaatcaacgccaaggggccgcatgcaggattc
tcgcgccgggcggcgatcaacgcgccgattcagggcacggcggcggatgtgatccggcgc
gcgatggtgcggatgccgggtgcgatcaacgggctgcccgccaagatgctgttgcaggtc
catgacgaactgttgttcgaagtcgccgaggattccgtggatccgctgatcgacgtggcg
cgcgaggtgatggagggtgcctcggacccggcggtgaaactggatgtgaagctgagcgtg
gatgctggccagggtgcgaactgggccgaggcgcactag
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