Ruegeria sp. THAF33: FIU92_16020
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Entry
FIU92_16020 CDS
T06269
Symbol
gntR
Name
(GenBank) HTH-type transcriptional regulator GntR
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
rut
Ruegeria sp. THAF33
Brite
KEGG Orthology (KO) [BR:
rut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rut03000
]
FIU92_16020 (gntR)
Transcription factors [BR:
rut03000
]
Prokaryotic type
Helix-turn-helix
LacI family
FIU92_16020 (gntR)
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GFIT
Motif
Pfam:
Peripla_BP_1
LacI
Peripla_BP_3
Peripla_BP_4
Sigma54_DBD
HTH_23
Sigma70_r4
HTH_10
HTH_3
HTH_IclR
TrmB
HTH_AraC
HTH_31
Motif
Other DBs
NCBI-ProteinID:
QFT74547
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Position
3153939..3154964
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AA seq
341 aa
AA seq
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MNSETKRPLTLRDVSEASGVSEMTVSRVLRNRGDVSDATRTRVLAAAKELGYVPNKIAGA
LASSRVNLVAVIIPSLSNMVFPEVMTGINQVLEDTELQPVVGVTDYLPEKEEKVLYEMLS
WRPSGVIIAGLEHTDAARAMLDSAGIPVVEIMDTDGKPVDAMVGISHRRAGREMAQAILK
AGYQHIGFMGTKMPLDHRARKRFEGFTEVLGKHGIEIEDREFYSGGSALAKGREMTQAML
DRSPDLDFLYYSNDMIGAGGLLYLLEQGVDIPGQIGLAGFNNVELLQGLPRKLATMDACR
LDIGRQAAQIIAERLKDPDSEIETRVTLTPKISYGDTLKRR
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
gtgaacagtgaaaccaaacgcccgcttacccttcgtgatgtgtccgaggcttccggtgtc
tcagagatgacggtgagccgggttctgcgtaacaggggggatgtgtccgacgccacccgc
acccgcgttctggccgccgcaaaagagctgggatatgtccccaacaagatcgcgggcgcg
ctggcatccagccgggtcaacctggtcgcggtaatcatcccctcgctttcgaacatggtg
tttcccgaggtgatgaccggcatcaatcaggtgctggaagataccgaactgcaacccgtg
gttggcgtgacggattatctgcccgagaaagaggaaaaagtgctgtacgagatgctctcg
tggcgaccctcgggcgtgatcattgccgggctggaacacactgacgcggcccgcgccatg
ctggattcggcgggcattccggtggtcgagatcatggataccgacggcaaacctgtcgac
gcgatggtgggcatctcgcatcgccgcgccgggcgcgagatggcgcaggcgattctgaag
gccgggtatcaacatatcggcttcatgggcaccaagatgccattggatcaccgtgcccga
aaacgctttgaagggtttaccgaagtgctaggcaaacacgggatcgagattgaagatcgc
gagttctattccggtggctctgccctggccaaggggcgcgagatgacacaggccatgctt
gatcggtcgcctgatctggatttcctgtattattccaacgatatgattggcgccggtggt
ctgttgtacctgctggagcaaggcgtggatatcccggggcagatcggtctggccgggttc
aacaacgtggaacttttgcagggtcttccgcgcaaattggcgacgatggatgcctgtcgt
ctggacataggacgtcaggccgcacagatcatcgctgaacgcctgaaggacccggattcc
gaaatcgagacacgggtcacgctgacccccaagatcagctatggcgataccctgaaacga
cgatga
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