Ruegeria sp. THAF33: FIU92_16145
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Entry
FIU92_16145 CDS
T06269
Symbol
lptB5
Name
(GenBank) Lipopolysaccharide export system ATP-binding protein LptB
KO
K01995
branched-chain amino acid transport system ATP-binding protein
Organism
rut
Ruegeria sp. THAF33
Pathway
rut02010
ABC transporters
rut02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rut00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FIU92_16145 (lptB5)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FIU92_16145 (lptB5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rut02000
]
FIU92_16145 (lptB5)
Transporters [BR:
rut02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
FIU92_16145 (lptB5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
BCA_ABC_TP_C
AAA_21
AAA_27
AAA_29
AAA_23
SMC_N
AAA_15
RsgA_GTPase
Dynamin_N
AAA_25
nSTAND1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QFT74572
LinkDB
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Position
complement(3177990..3178808)
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AA seq
272 aa
AA seq
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MLDNSEGYVTEDGRKIGGVVMEMKNITLRFGGVVAIKDISFDIREGEIRAIIGPNGAGKS
SMLNVISGFYVPQEGEVWFHGSKRPPMRPFEVAQQGIARTFQNIALFEGMSVLDNVMTGR
LNFMKTNILQQAIWRGKAEAEEVQNREAVEKIIDFLEIQHIRKTPVSRLPYGLKKRVELA
RALAAEPKLLLLDEPMAGMNVEEKEDMSRFILDVNDEFGTTIALIEHDMGVVMDLSDRVV
VMDYGKKIGDGTPDEVRNNQEVIDAYLGVSHD
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgctggataattccgaaggatatgtcaccgaagacggtcgcaagatcggcggtgtggtg
atggaaatgaagaacatcactctgcgctttggcggcgtggtggcgatcaaggatatctcg
ttcgatatccgcgagggcgagatccgcgccatcatcgggccgaacggcgccgggaaatcc
tcgatgctgaacgtgatctcgggcttctatgttccgcaggaaggcgaggtctggttccat
gggtccaagcgcccgcccatgcgcccctttgaggtggcgcagcagggaatcgcgcggacg
ttccagaacatcgccctgttcgagggtatgagcgttctggacaacgtgatgacaggtcgt
ctgaactttatgaagaccaacatcctccagcaggcgatctggcgcggcaaggccgaagcg
gaagaggtgcaaaaccgcgaggcggtcgagaagatcatcgactttcttgaaatccagcac
attcgcaagacgcctgtgtcgcgcttgccgtatggcctgaaaaagcgggtcgaactggcg
cgggcgctggcggcggaacccaaactattgctgctggatgagcctatggcaggcatgaac
gtcgaagaaaaagaggacatgagccggtttatcctggacgtgaatgacgaattcggcacc
accatcgccctgattgagcacgatatgggcgttgtgatggatctcagcgaccgggtggtc
gtgatggattacggcaagaagatcggcgacggcacacccgatgaggtgcgcaacaaccag
gaagtcatcgacgcctatctgggggtcagccatgattaa
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