Ruegeria sp. THAF33: FIU92_16150
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Entry
FIU92_16150 CDS
T06269
Name
(GenBank) Long-chain-fatty-acid--CoA ligase FadD15
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rut
Ruegeria sp. THAF33
Pathway
rut00061
Fatty acid biosynthesis
rut00071
Fatty acid degradation
rut01100
Metabolic pathways
rut01212
Fatty acid metabolism
rut02024
Quorum sensing
rut04146
Peroxisome
Module
rut_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rut00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
FIU92_16150
00071 Fatty acid degradation
FIU92_16150
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
FIU92_16150
09145 Cellular community - prokaryotes
02024 Quorum sensing
FIU92_16150
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rut01004
]
FIU92_16150
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rut04147
]
FIU92_16150
Enzymes [BR:
rut01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
FIU92_16150
Lipid biosynthesis proteins [BR:
rut01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
FIU92_16150
Exosome [BR:
rut04147
]
Exosomal proteins
Exosomal proteins of breast milk
FIU92_16150
Exosomal proteins of breast cancer cells
FIU92_16150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QFT74573
LinkDB
All DBs
Position
complement(3178887..3180860)
Genome browser
AA seq
657 aa
AA seq
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MAQTQSGAEGMHSLPALLHRNATQFGDAPAYREKEFGIWQCWTWAETAAEIRALALGFLE
LGVEKGDHIAVIGRNRPAHYWSMVAAQMVGAIPVPLYQDAVAEEMAYVLEHCGAKYVVCG
DQEQVDKVIEIQENLHQVKHILYTDKRGMRKYDHSQMNALDDIKAEGSAGHARFDAELDR
RIGEITYDDTCVMLYTSGTTGKPKGVVLSNRNVIESAKNSAEFDHLTRNEDILSYLPMAW
VGDFIFSIGQAYWCGFCVNCPESADTMMTDLREIGPTYFFAPPRVFETQLTNVMIRMEDA
SKLKQRMFHYFMAHAKKVGGRLLDGKPVSLGDRLKYALGNLLVYGPLKDTLGYGRFRVGY
TAGEAIGPEIFDFYRSLGINLKQLYGQTEATVFITVQPDGEVRADTVGVPAPDVEIRIDD
KGEIHYRSPGVFVEYFKNPDSTASTKDPEGWVATGDAGFIEESSGHLRIIDRAKDVGKMA
DGSMFAPKYVENKLKFYPDILEAVLFGNGKDRCVAFINIDLTAVGNWAERNNVAYASYQE
LAGHPRVLETIKAHVEEVNKSVAADEMLSGCQVHRFVVLHKELDADDGEMTRTRKVRRGF
VEDKFSDIIAALYDGSKTVSTTTEVTYEDGRKGSISATLEIVDAPVVPVAQHKVAAE
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
ttggctcagacgcagtcgggcgccgaagggatgcactcccttccggcgctgctacatcgc
aatgcgacgcagttcggggatgccccggcttaccgcgaaaaggaattcgggatctggcaa
tgctggacctgggcggaaacggccgccgagatccgcgcgctggcgcttggatttcttgaa
cttggcgttgaaaagggtgaccacatcgccgtaatcgggcgcaaccgcccggcacattac
tggtcaatggttgcggcgcagatggtcggtgccattccggtccctctctatcaagacgcg
gttgccgaagagatggcctatgtgctggagcattgcggagcgaaatatgtcgtctgcggc
gatcaggagcaggtcgacaaggtcatcgagattcaggaaaacctgcatcaggtcaaacac
atcctctataccgacaagcgcggtatgcggaaatacgaccacagccagatgaatgccctt
gacgacatcaaggccgagggcagcgccggtcatgcgcgtttcgacgccgaactggacagg
cgcatcggcgagatcacctatgacgacacctgcgtgatgctttatacctcgggcaccaca
ggcaagcccaagggcgtggtgctgtcaaaccgcaacgtgatcgaaagtgcaaagaactcg
gccgaattcgaccacctgacccgcaacgaagacatcctgtcctatctgccgatggcctgg
gtgggggatttcatcttttccatcggtcaggcctactggtgcgggttctgcgtgaactgc
cccgaaagcgccgacacgatgatgactgacctgcgcgagatcgggccgacctatttcttc
gcgccgccgcgggtcttcgagacccagctgaccaacgtgatgatccgaatggaggatgcc
agcaagctcaagcagcgcatgttccactacttcatggcgcatgccaagaaggtcggcggc
cggttgctggatggcaagccggtgagcttgggtgacaggttgaaatatgcgctgggcaat
ctgttggtttacgggccgctcaaagacacgctgggatatgggcgctttcgggtgggctat
acggcgggtgaggcgatcgggccggagatctttgatttctatcgctctttaggcatcaac
ctgaaacagttgtacggccaaaccgaggcgaccgtgttcatcaccgtccagcccgacggc
gaggtgcgcgccgacaccgttggcgtcccggcccccgatgtcgagatcaggatcgacgac
aagggcgagatacactaccgctcgcctggcgttttcgtcgaatatttcaagaacccggac
tcgaccgcatcgaccaaggaccctgaaggctgggtggccacgggcgacgcggggttcatc
gaggaaagctcgggtcatctgcggatcatcgaccgcgccaaggacgtgggcaagatggcc
gacgggtcgatgttcgcgccgaaatatgtcgagaacaagctgaagttctatcccgatatt
ctggaggcggtgctgttcggcaatggcaaggatcgctgtgtggccttcatcaatatcgat
ctgaccgcggtcggcaactgggccgaacgcaacaacgtggcctatgcctcgtatcaggaa
ctggcgggacatccgcgcgtgctagagacgatcaaggcccatgtggaagaggtgaacaag
tcggtcgccgctgacgagatgctatcgggctgtcaggtgcaccgctttgtggtgctgcac
aaggaactggatgccgatgatggcgagatgacccggacccgcaaggtgcggcgtgggttt
gtcgaggacaagttcagcgacatcattgccgcgctttatgacgggtccaagacggtttcg
accacgaccgaggtgacctatgaggatggtcgcaagggatcgatttcggcgacgctggaa
attgtcgatgcgccggttgttcccgtcgcccaacacaaggttgccgcagaatga
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