Ruegeria sp. THAF33: FIU92_17310
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Entry
FIU92_17310 CDS
T06269
Symbol
rnd2
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rut
Ruegeria sp. THAF33
Brite
KEGG Orthology (KO) [BR:
rut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rut03016
]
FIU92_17310 (rnd2)
Enzymes [BR:
rut01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
FIU92_17310 (rnd2)
Transfer RNA biogenesis [BR:
rut03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FIU92_17310 (rnd2)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QFT74798
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All DBs
Position
3424308..3425027
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AA seq
239 aa
AA seq
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MVKDLASNGPRLSDGVEFGDQTAYLGGDIAQRNSRVANHLYKNDLPDGLDLGPVVAIDCE
TMGLNPHRDRLCVIQMSGGDGNSHIIQVDKGQTEAPNLSAMLENPDVLKLFHFGRFDIAA
MYHTFGALAAPVYCTKIASRLVRTYTDRHGLKNLCQELIGVDISKQQQMSDWGAETLTDA
QLDYAASDVLYLHRLRDELNKRLAREGRTEMAQACFDFLPMRAKLDLAGWPETDIFAHS
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaggatttggcatcgaatggcccgcgactttcggacggcgttgagtttggggac
caaaccgcctatctcgggggcgacatcgcacaaaggaatagtcgcgtggcgaaccatttg
tacaaaaacgatctgccggatgggctggatctgggcccggttgtggccattgactgtgaa
accatggggctgaacccgcatcgcgatcgcctgtgcgtgattcaaatgtcaggcggtgac
ggaaacagccatatcattcaggtggacaagggccagaccgaagccccaaacctgagtgcc
atgctggaaaaccccgatgtcctgaagctgttccatttcgggcggttcgacatcgccgcg
atgtatcacacctttggtgccctggccgcgccggtttactgcaccaagatcgccagccgg
ctggtgcgcacctacaccgaccgccacgggttgaagaacctgtgccaggaactgatcggc
gtggatatctcgaaacaacagcagatgagcgactggggcgctgaaaccctgaccgatgct
cagctggactatgcggcctcggacgttctttatctgcaccgcctgcgcgacgagttgaac
aagcgactggcgcgcgagggccggaccgagatggcgcaggcctgttttgatttcctgccg
atgcgtgcgaagctggatctcgccggttggcccgaaacggatatctttgcacactcatga
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