Ruegeria sp. THAF33: FIU92_17400
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Entry
FIU92_17400 CDS
T06269
Symbol
nikA
Name
(GenBank) Nickel-binding periplasmic protein precursor
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rut
Ruegeria sp. THAF33
Pathway
rut02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rut00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FIU92_17400 (nikA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rut02000
]
FIU92_17400 (nikA)
Transporters [BR:
rut02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
FIU92_17400 (nikA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QFT74816
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Position
3436965..3437786
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AA seq
273 aa
AA seq
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MTRIDRRALFASGAAAALLAATGASLAGTPKKGGTLRLAVPRDDSLEQVARGAVFDTMTE
IAPDSTLRGELATGWQTDADARVWNFDLRDDAVFHDGEPLQIADVLAVLAEIGRPEALAP
NRLRLELAEANPGLPFLLADSRFVVARAGETVSPLRKANGTGCYRVERAEDGRHFLGRRV
EGHYKEGQAGWADAFEVIVIPDPAVRAEALRDGYVDIAALPDRAGMRGTRGVRFHPSEAD
MALAVSNAVGMPRQIAGNGALDDGRIAERWWMV
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcatcgatcgccgtgctctctttgcctctggtgccgctgccgcattgctggcg
gcgacaggagcatcccttgccggtacgcccaagaaaggcgggacattgcgtctggccgtt
ccgcgcgatgacagcctcgagcaagtggcgcgtggggccgttttcgacacaatgactgaa
atcgccccggatagtacgttgcgcggtgagcttgcgaccggctggcaaaccgacgcagac
gcacgggtctggaactttgatctgcgtgatgacgcggtctttcacgatggcgaaccgttg
cagattgccgatgtcctggccgttctggccgaaatcggaaggcccgaggcgcttgccccc
aaccgcctgcggctggaacttgccgaggcaaatcccggattgcctttcctgttggccgac
agccgctttgtcgttgcgcgcgccggtgaaaccgtatccccgttgcgcaaggccaacggc
accggctgctatcgtgtcgaacgggcagaagatggccgccattttctgggccgccgtgtc
gaggggcattacaaagagggtcaggccggatgggctgacgcgtttgaggtcattgtaatc
ccggaccctgccgtgcgggccgaggcgctgcgggacgggtatgtcgatatcgcggcgctt
ccggatcgggccggaatgcgaggcacgcgcggtgtccggttccacccgtccgaggccgac
atggcccttgccgtatcgaatgctgtcgggatgccgcggcagattgccgggaatggtgcg
ctggacgatggccgcatcgccgaacggtggtggatggtgtaa
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