Ruegeria sp. THAF33: FIU92_19820
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Entry
FIU92_19820 CDS
T06269
Symbol
glyA3
Name
(GenBank) Serine hydroxymethyltransferase 2
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rut
Ruegeria sp. THAF33
Pathway
rut00260
Glycine, serine and threonine metabolism
rut00460
Cyanoamino acid metabolism
rut00630
Glyoxylate and dicarboxylate metabolism
rut00670
One carbon pool by folate
rut00680
Methane metabolism
rut01100
Metabolic pathways
rut01110
Biosynthesis of secondary metabolites
rut01120
Microbial metabolism in diverse environments
rut01200
Carbon metabolism
rut01230
Biosynthesis of amino acids
rut01240
Biosynthesis of cofactors
rut04981
Folate transport and metabolism
Module
rut_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rut00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
FIU92_19820 (glyA3)
09102 Energy metabolism
00680 Methane metabolism
FIU92_19820 (glyA3)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FIU92_19820 (glyA3)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
FIU92_19820 (glyA3)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
FIU92_19820 (glyA3)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
FIU92_19820 (glyA3)
Enzymes [BR:
rut01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
FIU92_19820 (glyA3)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
QFT75298
LinkDB
All DBs
Position
pTHAF33_a:537580..538833
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AA seq
417 aa
AA seq
DB search
MFKTSLIEADPVIAASISRERERQAEQIELIASENIVSKAVIEAQGSVLTNKYAEGYPGR
RYYGGCEYVDEVEVEAIERLKKLFGCEYANVQPHSGAQANGAVKLALLNPGDTILGMSLD
AGGHLTHGAKPAQSGKWFRPVQYGLTDAGLIDYDQVAELARAEKPRLIIAGASAYSQKID
FARFREIAEEVGAWLLADMAHIAGLVATGLHPSPVGHAHVVTSTTHKTLRGPRGGIILTN
DEALAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALKPEFKEYMQCVVDSASTLASVMMA
RGCDIVSGGTQNHLMLVDLRPIGVTGKDAEAALERAGFTCNKNSVPGDPEKPTITSGIRL
GTAAGCSRGFGPEEFRQIGHLIGDVLEALAKSPDGDETVEKETRKQVRALCASYPIY
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaaacgtcgctgattgaggcagatcccgtcattgctgcgtccatctcacgcgag
cgtgaacgccaggcggaacagatcgagttgatcgcctcggagaacattgtctcgaaggcc
gtgatcgaagcgcagggttcggtcttgaccaacaaatatgccgaaggctatccgggccgc
cgctattatggcggctgcgaatatgtcgatgaggtcgaagtcgaggcgatcgaacgcctc
aagaagctgtttggctgtgaatatgccaacgttcagccccattccggcgcacaggccaac
ggggccgtcaagctggcgttgctgaacccgggcgataccattcttggcatgtcgctggac
gcaggtggccatctgacccacggtgcgaaaccggcgcagtccggcaaatggttccggccc
gtgcagtacggcctgaccgatgcagggctgatcgattatgatcaggtcgccgaattggcg
cgggcggaaaagcccaggctgatcatcgcaggtgcgtctgcctactcacaaaagatcgac
tttgccagattccgtgaaatcgcggaagaggttggcgcatggctgctggccgatatggct
catattgccggattggtggcgaccggcctgcacccctcgcctgtaggacacgcacatgtc
gtgacctcgaccacgcacaagacgctgcgcggccctcgtggcggcatcatcctgaccaat
gacgaggcgctggcgaaaaagatcaactcggccgtattcccaggcctgcagggtggcccg
ctgatgcacgtcatcgcaggcaaggcggtggcctttggcgaggcactgaaacccgaattc
aaggaatacatgcagtgcgtcgttgacagcgcatcgaccttggccagcgtcatgatggcg
cgcggatgtgacatcgtttccggcggcacccagaaccacctgatgctggtcgatctgcgc
ccgatcggcgtaaccggcaaggacgccgaggcggcgctcgaacgggccggctttacctgc
aacaagaacagcgttcccggagatccggaaaaacccaccatcaccagcggcatccgtctg
ggcaccgccgccgggtgcagccgtggctttggcccggaagagttcaggcagatcggccat
ctgatcggtgatgttctggaggcgctcgcgaagtctcctgacggtgacgaaaccgtcgaa
aaggaaacccgcaaacaggttcgcgctctttgcgcaagctacccgatctactga
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