Ruegeria sp. THAF33: FIU92_20170
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Entry
FIU92_20170 CDS
T06269
Symbol
gabD
Name
(GenBank) Succinate-semialdehyde dehydrogenase [NADP(+)]
KO
K26061
L-aminoadipate-semialdehyde dehydrogenase
Organism
rut
Ruegeria sp. THAF33
Pathway
rut00310
Lysine degradation
rut01100
Metabolic pathways
rut01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rut00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
FIU92_20170 (gabD)
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Gene cluster
GFIT
Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
QFT75368
LinkDB
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Position
pTHAF33_a:613963..615474
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AA seq
503 aa
AA seq
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MKDIVMTAQTTLANLDLTEAQLKGGTLKVTSPIDGSLLAEVHETPISDMDAIFSRAKAAF
REWRVVPAPRRGELIRLLGEELRAAKDDLGALVSWEAGKITSEGLGEVQEMIDICDFAVG
LSRQLYGLTIASERPGHRMMETWHPAGPVGVISAFNFPVAVWSWNAALAIVCGDPVIWKP
SEKTPLTALACQKIFERALARFGDAPDGLLQTLIGGADLGERLVASEDVPVISATGSTRM
GRAVAPIVAQRFGKCILELGGNNAMIVGPSADLEMAVRAIVFSAVGTAGQRCTTLRRLIV
HNSIREELVSRLKKAYSGLPIGNPLTDGTLVGPLVDEAAGAAMTAALKAAEAEGGSVFGG
NRVTEGVPTGVYMEPAIVEMPGQTATVKTETFAPILYVMGYDDFDDAVELQNDVPQGLSS
CVFTLNMREAEQFLSAAGSDCGIANVNIGPSGAEIGGAFGGEKETGGGRESGSDAWKAYM
RRQTNTVNYSAELPLAQGVKFDI
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacatcgtaatgacagcccaaaccacgcttgcaaacctggatctgaccgaggcc
caactcaaaggcggcacgctcaaggtcacgtcgccgattgacggaagcctgctggccgaa
gtgcacgagacgccgatctcggacatggacgccatcttttcccgtgcaaaggccgcgttc
agggaatggcgcgtggtccccgccccgcgccggggtgaactgatccgcctgttgggtgaa
gagctgcgcgcggccaaggatgacctgggtgcactggtcagttgggaagcgggcaagatc
acctcggaaggtctgggcgaagtgcaggagatgatcgacatctgtgactttgccgtcggc
ctgtcgcgtcagctttatggtctgaccattgcgtccgaacgtcccggccaccggatgatg
gaaacctggcatcctgctggcccggttggtgtgatttccgcgttcaatttcccggtcgcg
gtttggtcgtggaatgctgctctggccatcgtatgcggtgatccggtgatctggaaaccg
tccgaaaaaaccccgctgacggcgctggcctgtcaaaagattttcgaacgcgccctggcc
cgatttggcgatgcgccggacggtctgctgcaaacgcttatcggtggcgcagatctggga
gaaagactggtggccagtgaagatgttccggtgatctcggccacgggatcgacccgcatg
ggccgtgctgtcgcccccatcgtcgcacagcgctttggcaagtgcattctggaactgggt
ggcaacaacgcaatgatcgtcggcccttcggctgatttggagatggctgtgcgcgcgatt
gtcttttcggcagttggtaccgccggtcaacgctgcaccacgctgcgtcgcttgatcgtg
cacaactcgatccgcgaagaactggtgagccgtctgaaaaaagcctattcgggtctgccc
atcggcaatcctctgacagacggcacgttggttgggccgcttgtggacgaagcggcgggc
gcggcgatgaccgctgctttgaaagcggccgaagcggaaggcggttcggtgttcggcggc
aaccgcgttaccgaaggcgttccgacaggcgtatacatggaacctgcgattgtcgaaatg
ccgggtcagaccgcgaccgtgaaaaccgaaacctttgcgccgatcctctacgtcatgggc
tatgacgatttcgacgacgcggtagagcttcagaatgacgtaccgcaaggcctttcatcc
tgcgtgtttaccctgaacatgcgcgaggccgagcagttcctgtccgcggctggatccgat
tgcggaattgccaacgtcaatatcgggccctcaggggcagagatcggtggcgcctttggc
ggagagaaggaaaccggcggcgggcgcgaaagcggttcggacgcgtggaaagcctatatg
cgccgacagaccaacaccgtgaattactcggccgaacttccactggcccagggcgtcaaa
ttcgacatctga
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