Ruegeria sp. THAF33: FIU92_20265
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Entry
FIU92_20265 CDS
T06269
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
rut
Ruegeria sp. THAF33
Pathway
rut00521
Streptomycin biosynthesis
rut00523
Polyketide sugar unit biosynthesis
rut00525
Acarbose and validamycin biosynthesis
rut00541
O-Antigen nucleotide sugar biosynthesis
rut01100
Metabolic pathways
rut01110
Biosynthesis of secondary metabolites
rut01250
Biosynthesis of nucleotide sugars
Module
rut_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
rut00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
FIU92_20265 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FIU92_20265 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
FIU92_20265 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FIU92_20265 (rfbB)
00525 Acarbose and validamycin biosynthesis
FIU92_20265 (rfbB)
Enzymes [BR:
rut01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
FIU92_20265 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
NmrA
NdhO
Motif
Other DBs
NCBI-ProteinID:
QFT75387
UniProt:
A0A5P9GKD4
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Position
pTHAF33_a:complement(638259..639299)
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AA seq
346 aa
AA seq
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MKILVTGGAGFIGSAVIRRAIADGHSVVNVDALTYAACLDNVASVADAPGYVFEHADIRD
AAAMSAILDRHQPDAIMHLAAESHVDRSIDGPAAFIDTNLTGTYVLLEAARAYWLGAGRP
EHFRFHHISTDEVFGSLGETGFFTEDSPYQPNSPYSASKAGSDHLVRAWRETYGLPVVLT
NCSNNYGPYQFPEKLIPVVILSALAGKPIPIYGKGDNIRDWLHVDDHAEALLLVLEKGEL
GRSYNIGGENEMTNLDLVRMLCSILDRLKPGETPYADLITFVADRPGHDQRYAIDPTRIR
TELNWRPSYTPETGLEQTVQWYLDNSAWLNALRARSGVGERLGVAK
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctggttacgggcggggcgggctttatcggctctgccgttatccgtcgcgcg
attgccgatgggcattcggtcgtcaatgtcgatgccctgacctacgcggcctgtctggac
aatgttgcctctgtcgcggatgcgccgggatacgtttttgaacatgcggatatccgggat
gccgccgccatgtcggcgatactggacaggcaccagccagacgcgatcatgcatctggcc
gctgaaagccatgttgaccgctcgatcgatggcccggccgcgttcatcgacacgaacctg
accgggacctatgtattgctggaagcagcacgcgcctattggctgggtgccggccggccc
gagcatttccggtttcatcacatatcaaccgacgaggtctttgggtccttgggagaaacc
gggtttttcaccgaagacagcccataccagccgaactcaccctattcggcctcgaaagcg
ggatcggatcatctcgtgcgggcgtggcgtgaaacatacggcctgccagtggttcttacc
aattgctccaacaactacggcccttaccagtttccggaaaagctgatccccgttgtcatc
ctcagcgcgctggcgggcaaaccgatcccgatttacgggaaaggcgacaacattcgcgac
tggctgcatgtcgatgaccatgccgaagccctgttgctggtgctcgaaaagggtgaactg
ggccgcagctacaatatcggtggcgagaatgagatgaccaatcttgatcttgtcagaatg
ctgtgttcgatcctggatcgcctcaagccgggtgaaacgccctatgcggatttgatcacg
ttcgtcgctgaccgccccggtcacgatcagcgttatgccatcgatccgacccggattcgc
accgaactgaactggcgtccttcctacacgcctgaaaccgggctggaacagacggttcag
tggtatctggacaacagcgcatggttgaacgccttgcgggcccgcagtggcgtgggtgag
cggctgggtgttgccaaatga
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