Ruegeria sp. THAF33: FIU92_20295
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Entry
FIU92_20295 CDS
T06269
Symbol
apxIB
Name
(GenBank) Toxin RTX-I translocation ATP-binding protein
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
rut
Ruegeria sp. THAF33
Pathway
rut02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rut00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FIU92_20295 (apxIB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rut02000
]
FIU92_20295 (apxIB)
02044 Secretion system [BR:
rut02044
]
FIU92_20295 (apxIB)
Transporters [BR:
rut02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
FIU92_20295 (apxIB)
Secretion system [BR:
rut02044
]
Type I secretion system
Adhesin protein transporter
FIU92_20295 (apxIB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
Peptidase_C39
AAA_21
ABC_ATPase
nSTAND3
AAA_29
AAA_18
Motif
Other DBs
NCBI-ProteinID:
QFT75393
LinkDB
All DBs
Position
pTHAF33_a:648571..650718
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AA seq
715 aa
AA seq
DB search
MSTLKSMPDRARLTCYEACILNIAATLERPLTLATIQASQTGSDGDLTVRDILSVAENTG
LQAGYGARRIASFDEALAPALLLMTENKAVVYHGRAKNGALLVYDPELGEGIGEASEEQL
AKSYTGFAVLFRRNHTDELDTGHTAYRGHWFRAALSANRWTYIQVALAAALANLLGLSTS
VFIMVVYDRVLPNEATESLIALTAGVALALLFDFALKLLRAAFIDKAGQKADLLMGRRIF
DHVLNIQMKSRAGSTGAMTSTIREFETLREFFTSATLVAVVDLPFIWLFVFVIYLVGGQL
ALVPALAVPVVLLTGLAVQPLLSRMAEKSLSDGQSKQSVLVEAVSGLETIKTTAAGRQMR
SRWEQAIERQSSHGAQSRAVTQFALNLTGFTQQAAQVLIVFYGVFLITDGQTSMGALVAS
VMLTGRALAPLGQLAQTLTRLNQARSAYRNLNALMMAESERPQGRTWVNRPHFKGAIAFN
NVYFSYPDQGEDTLQGVSFTIKPGEKVAILGQIGCGKSTIARLLLGLYAPRVGSVTFEGL
DIRQIDPGDLRRNIGSVLQDIWLFSGSVRDNIASGTIRPKDHELIEAGRAAGVEDFVANH
PGGYDLQLAERGEGLSGGQRQAIALARALIGRPPVLLLDEPTSAMDVKTEAQVIQRLKEC
TAESTMVVITHRTSLLELVDRVIILEHGKIAADGPKSMLTQHVRRTGRHLNVAAS
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgttgaaatcaatgccggatcgcgcccgtttgacatgctacgaagcctgcatt
ctgaatatcgccgcgacgcttgaacgccctctgacccttgcaacgatccaggcgtcgcag
accggttcggacggggatctgactgttcgtgacatcctctcggtggcggaaaacacaggt
ctacaggcgggctatggcgcgcggcgcatcgcgagttttgacgaagcattggctccggcc
ttgttgctgatgaccgaaaacaaggcggttgtgtaccatggccgcgcaaaaaacggtgcc
ttgctggtctatgacccggaacttggcgaaggaatcggcgaagcttcagaagaacagctg
gccaagtcctacaccggtttcgctgtcttgtttcggcgaaatcatacagatgaattggac
accggtcacacggcttaccgaggtcattggtttcgcgcggcgctgtccgccaatcgatgg
acttacatacaagttgctctcgctgcggcactggcaaaccttcttggcttgtcgacctca
gtttttatcatggttgtctatgatcgcgtgttgcccaatgaggcaaccgaatcgctcatt
gccttgacggcgggcgtggccttggcgctgctatttgacttcgcgctaaaattgctgcga
gcagcgttcatcgacaaggccgggcaaaaagccgacttgctcatggggcggcgaattttc
gaccacgttctgaatatccagatgaagtcacgcgcgggttccaccggcgctatgaccagt
accatccgtgagttcgagaccctgcgtgagttcttcacgtccgcaacgcttgttgccgtc
gtggatctgccgttcatctggttgttcgtgtttgtgatttacctggtcggcggacaactg
gcattggtcccggctctggccgtgcctgtggttctgctgacaggtttggccgtacagccg
cttctgtcccgcatggcagaaaagagcctgtctgacgggcaatccaaacaatcggtcctc
gtagaagctgtctcgggccttgaaactataaagacaacggccgcgggccggcaaatgcgt
tcccgatgggagcaggcgatagaacggcaatcctcgcacggtgctcagagccgggccgtt
acacaatttgctcttaacctcaccggttttacgcaacaagcggcacaggtgttgatcgta
ttttatggtgtttttctgatcacagacggtcagaccagcatgggcgctttggttgcctcg
gtgatgctgacagggcgggcactggcacctttggggcagttggcgcaaacgttgacaagg
cttaaccaagcccgaagcgcataccgaaacctcaacgcgctgatgatggcggaaagcgaa
cgcccacaaggccgaacatgggtgaaccggccccatttcaaaggggcgatcgccttcaac
aacgtgtatttttcctaccctgatcagggggaagataccctgcaaggcgtttcattcacg
atcaaaccgggtgaaaaggtggcgatcctgggtcagattggctgcgggaaaagcaccatc
gcacgtcttttgcttggattgtacgcgccgcgtgtaggatctgtcacattcgaaggcctt
gatatccgccagatcgatcctggtgatctgcgacgcaatatcggatccgtcctgcaggat
atatggctcttttccggatcagtccgggacaatatcgcaagcggcacaatccggccaaaa
gatcacgaactgatcgaagcaggccgcgccgccggggttgaggatttcgtggccaaccat
cccgggggttacgatcttcaactcgcggaacgcggcgaaggcctctctggcggacagcgg
caagccattgccctggcaagggcactcataggccgtccgccggttctcctgctggatgaa
ccaacaagcgcgatggatgtcaaaaccgaagcccaggttatccaacgtctgaaagaatgc
acggcagagtccaccatggttgtcattacacacagaaccagcctgttggagcttgttgac
agggtcatcatccttgaacacgggaaaatcgcggcggatggccccaaaagcatgctgacg
caacatgttcgtcggacagggaggcacctgaatgtcgcagcatcctga
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