Ruegeria sp. THAF33: FIU92_20770
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Entry
FIU92_20770 CDS
T06269
Symbol
fadB1
Name
(GenBank) Fatty acid oxidation complex subunit alpha
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
rut
Ruegeria sp. THAF33
Pathway
rut00071
Fatty acid degradation
rut00362
Benzoate degradation
rut00650
Butanoate metabolism
rut01100
Metabolic pathways
rut01120
Microbial metabolism in diverse environments
rut01200
Carbon metabolism
rut01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
rut00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
FIU92_20770 (fadB1)
09103 Lipid metabolism
00071 Fatty acid degradation
FIU92_20770 (fadB1)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
FIU92_20770 (fadB1)
Enzymes [BR:
rut01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
FIU92_20770 (fadB1)
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DAO
NAD_binding_2
Pyr_redox_2
Pyr_redox
FAD_oxidored
NAD_binding_8
HTH_31
F420_oxidored
TrkA_N
RS_preATP-grasp-like
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
QFT75488
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All DBs
Position
pTHAF33_a:complement(762681..764714)
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AA seq
677 aa
AA seq
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MSQSSLVSVEFKGDVAWVTIDNPPVNATSTGVRQGLSDAVDAVKGARVAVLCCAGKTFVA
GGDMSEFDAPPVEPHLPDVVQKIEDSEVPFIACMHGNVLGGGFEIAMACAWRIAAPGTGF
GLPEVNVGLIPGAGGTQRLPRLVGMQAAIDMACSGKILKAETLAELGGVDRVAEDPRAAV
LELIADLPERPIPVSQRAVAEYAPDLLETSREALKKRAKGQKSPLENLTALGWSVEPFAT
AQPKERARHLELRQSPESRALRYAFFAERAVSKPSLIKDVAARDITRIAVVGGGLMGAGI
ATAALNGGLSVTLIERDADAAAAAHSRVEGLLQGAVKRGKMSEAQLRDRLAAFRAVNSYA
DAADAELAIEAVFEDLSVKQQVFDELARHMSSDAILATNTSYLDPREIFAGVGNQARCIG
LHFFSPAHVMKLLEVVVAPQTSAEVVATAVALGKKLRKISVLSGICDGFIGNRMLAAYRR
AADYLLADGALPYQVDRAMRAFGMPMGPYELQDLTGLQIAWANRKRNAANRDPNERYVTI
ADQLCQRERFGQRVGKGWYRYEEGSRDPVRDPEVEALIEAYSDQQGITRRDFSDEEICSR
LLAVLANEGALIIEEGIAENAEAVDMVQIHGYGFPRWRGGPMNYCNEIGISRCAPNMLTV
AKESPGSWRLAGQLENN
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagtcgtcgctggtgagcgttgaatttaagggcgacgtggcgtgggtcaccatt
gacaacccgccggtaaacgcgacgtcgacaggtgttcggcaagggctgtctgacgcggtt
gatgcggtcaagggcgcgcgcgtggcggtgctgtgttgcgctggaaaaacctttgtcgca
ggcggcgacatgtccgaattcgatgcgccgccggtcgagccgcacttgcccgacgtggtt
cagaaaatcgaagacagcgaggttccgttcattgcctgcatgcatggcaacgtgctgggt
ggcgggttcgaaatcgccatggcctgtgcatggcgtatcgcggcgccgggaacgggtttt
ggcctgccggaagtcaatgtgggcttgatccccggggcagggggcactcaacgattgccg
cgtctggtcgggatgcaggctgcaattgacatggcctgttcgggcaaaattctcaaggca
gagacactggccgagcttggcggcgtcgaccgcgtcgccgaagaccccagggctgctgtt
ctggaattgattgccgacctgcccgaacgcccaatacctgtcagccagcgtgctgtggcg
gaatatgcaccggatctgttggagacgagccgcgaggctttgaagaagcgcgccaagggt
cagaaatcgccgttggaaaacctgacggcgcttggttggtcggtcgagccatttgctacc
gcacaaccgaaagagcgcgcgcgccatctggagttgcgccaaagcccggaaagccgcgct
ttgcgctacgctttttttgctgaacgtgccgtgtccaaaccttcgttgatcaaagacgtg
gccgcccgtgacataacacggatcgccgttgtcggaggtgggttgatgggggcagggatc
gcaactgcggccctgaacggcgggttgtccgtgaccttgatcgagcgagacgctgacgcc
gcggccgcagcgcacagtcgggtcgagggtctgctgcaaggcgcggtcaagagaggcaag
atgtccgaggcgcagcttcgggatcgccttgctgcgtttcgtgcggtgaacagttatgca
gacgctgcggatgccgaattggcgatcgaggccgtctttgaagacctgtccgtcaagcag
caggtgtttgacgagctggcaaggcatatgagcagcgatgcgattttggccaccaatacc
tcctatctggacccgcgcgagattttcgccggcgtcggcaatcaggcccgatgcatcggg
ttgcatttcttcagcccggcccatgtcatgaaactgctcgaggtcgtggtagctccgcaa
acctctgctgaagtggtcgcaaccgcggtcgcgcttggcaaaaagcttcgcaagatttcg
gtgctgtcgggtatctgcgatgggttcattggcaaccgcatgttggccgcctatcggcgc
gcggccgattatctgctggcagatggggcgcttccctatcaggtggaccgtgcaatgcgg
gcgttcgggatgcccatggggccttacgagcttcaggatctgaccggtcttcaaatcgcc
tgggcgaaccgcaaacgcaatgccgccaaccgcgacccgaacgaacgttatgtcaccatc
gcggaccagctttgtcagcgcgagcgtttcggccagcgtgtcggcaaagggtggtaccgc
tacgaagagggcagtcgcgatccagttcgggaccccgaagttgaggcattgatcgaagcc
tattccgaccagcaaggcatcacccgcagggatttttcggacgaggaaatctgttcgcgg
ttgctggcggtcttggccaacgagggcgctttgatcattgaagaggggatcgcggaaaac
gccgaagctgtcgatatggttcaaatccatggatacggctttccccgctggagaggagga
ccgatgaactattgcaacgaaatcggcatcagccggtgcgccccaaatatgctaaccgta
gcgaaagaaagtccaggttcatggcgcctcgcgggccaattggaaaacaattaa
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