Ruegeria sp. THAF33: FIU92_20810
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Entry
FIU92_20810 CDS
T06269
Symbol
ddc
Name
(GenBank) L-2,4-diaminobutyrate decarboxylase
KO
K01593
aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:
4.1.1.28
4.1.1.105
]
Organism
rut
Ruegeria sp. THAF33
Pathway
rut00350
Tyrosine metabolism
rut00360
Phenylalanine metabolism
rut00380
Tryptophan metabolism
rut01100
Metabolic pathways
rut01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rut00001
]
09100 Metabolism
09105 Amino acid metabolism
00350 Tyrosine metabolism
FIU92_20810 (ddc)
00360 Phenylalanine metabolism
FIU92_20810 (ddc)
00380 Tryptophan metabolism
FIU92_20810 (ddc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rut04147
]
FIU92_20810 (ddc)
Enzymes [BR:
rut01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.28 aromatic-L-amino-acid decarboxylase
FIU92_20810 (ddc)
4.1.1.105 L-tryptophan decarboxylase
FIU92_20810 (ddc)
Exosome [BR:
rut04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
FIU92_20810 (ddc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pyridoxal_deC
OKR_DC_1
Beta_elim_lyase
DUF4129
Motif
Other DBs
NCBI-ProteinID:
QFT75496
LinkDB
All DBs
Position
pTHAF33_a:complement(770781..772178)
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AA seq
465 aa
AA seq
DB search
MNWDTFSYWGQHISKWAADYHRTLAERPVRAQTAPGEIAAQLVATPPETGEPMDAIMADF
ERIVMPGITHWQHPRFFAYFPANAAPPSMLAEMLVTTIAAQCMLWQTSPAATEVEGVMVD
WLRQALGLPEGMTGVIQDSASSATLSAVLTMRERATGFTGNREGLNAKGALRIYCSDQVH
SSIDRACWVAGIGQDNLVKLPTQGPNFGIVPSALEAAIQNDVAAGHIPAGIVAITGGTGV
GACDDLMAVADIAQKYDLYTHLDAAWAGSAMICPEFRRALWQGADRYDSIVFNPHKWMGA
QFDCAIQFLRDATPQLDTLKIEPEYLKTTGAEVTNYSEWTIPLGRRFRALKIWFLLRSYG
LEGLRERIRNHVAWAGELAEKIGAIEGFEITTGPILSLFSFRCPGDDAQQQRLVDALNDD
GRIYLTQGMFDGRKIIRFQVGQFDTTRDDVLMAADVIRDVWEAMK
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgaactgggacacgttttcgtattggggtcagcacatctcgaaatgggcggcggattat
cacaggacacttgctgaacgtcccgtgcgggcgcagaccgcgccgggggaaatcgcggca
cagcttgttgcaacgccacccgagacaggcgagccgatggacgccatcatggccgatttc
gaacggatcgtgatgccgggcatcacccattggcagcatccgcgcttttttgcgtatttc
ccggccaacgctgcacccccgtccatgttggccgagatgctggtgacgactatcgcggcc
caatgcatgttgtggcagacctcgcctgccgcgaccgaggtcgagggcgtcatggtcgac
tggttgcggcaggcccttggattgcccgagggtatgaccggcgtcatacaggacagcgcc
tcttcggccaccttgtcggcggtactgaccatgcgggaacgggccaccggctttaccggc
aatcgggagggcctgaacgccaagggggcgttgcggatctattgttccgatcaggttcat
tcatcgattgaccgggcatgctgggttgccgggatcggtcaggacaatctggtcaagttg
cccacgcaggggccgaatttcggaattgtcccctcggcgcttgaggccgccattcagaat
gacgtcgccgccggacatatcccggccgggatcgttgcaattaccggtggcacaggtgtg
ggggcctgcgatgatctgatggccgtggctgatattgcccaaaaatacgacctctacacc
catctcgacgccgcctgggcgggttcggccatgatctgccccgaattccgcagggctctg
tggcagggcgccgaccgctatgacagcatcgtcttcaacccgcataagtggatgggtgcg
caattcgattgtgcgatccagttcctgagggacgccacgccgcagctcgatacgctgaaa
atcgaaccggaatacctcaagacgaccggagccgaggtgacgaattactcggagtggacc
atcccactgggccgcaggttccgggcgttgaaaatctggttcctgttgcggtcatatggg
ttggaggggttgcgcgaacgcatccgcaaccatgtggcatgggccggcgaactggcggaa
aagattggtgcgatcgaggggttcgagattacaaccggcccgatcctcagcctgttttcc
ttccgctgcccgggggacgatgctcagcagcagcgtctggtggacgcgctgaatgacgac
ggccggatttacctgacgcagggcatgttcgacggccgcaagatcatccgctttcaggtc
gggcagttcgataccacccgcgacgacgtgttgatggcggcggacgtgatccgggacgtg
tgggaggccatgaaatga
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