Ruegeria sp. THAF33: FIU92_22540
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Entry
FIU92_22540 CDS
T06269
Symbol
lptB7
Name
(GenBank) Lipopolysaccharide export system ATP-binding protein LptB
KO
K01995
branched-chain amino acid transport system ATP-binding protein
Organism
rut
Ruegeria sp. THAF33
Pathway
rut02010
ABC transporters
rut02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rut00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FIU92_22540 (lptB7)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FIU92_22540 (lptB7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rut02000
]
FIU92_22540 (lptB7)
Transporters [BR:
rut02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
FIU92_22540 (lptB7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_16
AAA_23
RsgA_GTPase
AAA_29
ATPase_2
AAA_33
AAA_14
nSTAND3
MMR_HSR1
AAA_22
AAA_30
AAA
AAA_28
SRPRB
AAA_25
cobW
DLIC
AAA_27
SRP54
Zeta_toxin
ATP-synt_ab
NACHT
Arf
Thymidylate_kin
Motif
Other DBs
NCBI-ProteinID:
QFT75842
LinkDB
All DBs
Position
pTHAF33_d:complement(5835..6578)
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AA seq
247 aa
AA seq
DB search
MLETRNLDKSFGAVHVTRDVSLKLERGERRVILGPNGAGKTTLFNQLVGELTPDSGSVHL
AGEDVTALPVAKRARRGLSRSYQKNTLFDGLTVEENLGLAAAVHTGNATQLWSDSLAKPE
VREIVEEVASQVNLMPFIHAKVSEISYGVRRQLEVGVALATRPLVLLMDEPTSGVGPEMS
KGFHDLLAGLPRDLTMLIIEHDMDLAFDVANTITVLNYGEVVFDGLPEEARGSSLLKEIY
LGSWEDA
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgcttgagacacgtaatctggacaaaagttttggcgccgttcacgtcacgcgcgatgtg
tcgctaaagctggaacgtggcgagcgccgggtgatcttggggccgaacggggcgggcaag
acgacgctcttcaaccagcttgtcggcgagctgaccccagacagcggatcggtgcatctc
gccggtgaagatgtcacagcacttcccgttgccaaacgcgcccgtcgtgggctttcgcgg
agctaccagaagaacacgttgttcgatggtctgacggtcgaggaaaaccttgggcttgcg
gcggcagtccacaccggcaatgcgacgcagctttggtcggacagcctggcaaaacccgaa
gtccgtgagatcgtggaggaggtggcaagccaggtgaacctgatgcctttcatccacgcg
aaagtgtccgagatcagctatggcgtgcgtcgccagcttgaagtcggtgtggcgctggcc
acgcggccgctggttctgctgatggacgaaccgaccagcggcgtcgggccggaaatgtcg
aaaggctttcacgacctgctggcgggcctgccccgcgacctgaccatgctgatcatcgag
catgacatggaccttgcgtttgacgtggccaacacgatcacggtgctgaactacggcgaa
gtggtctttgatggtctgcccgaagaggcacgcgggtcgagcctgctcaaggaaatctat
ctggggagctgggaagatgcttga
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