Rosistilla ulvae: EC9_18360
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Entry
EC9_18360 CDS
T09881
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ruv
Rosistilla ulvae
Pathway
ruv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ruv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EC9_18360 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ruv03019
]
EC9_18360 (rhlE)
Enzymes [BR:
ruv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EC9_18360 (rhlE)
Messenger RNA biogenesis [BR:
ruv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EC9_18360 (rhlE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QDS87657
UniProt:
A0A517LYF7
LinkDB
All DBs
Position
complement(2445990..2447390)
Genome browser
AA seq
466 aa
AA seq
DB search
MKTFQELDLIAPLQRALADENYEIPTPIQAQTIPAALDQRDVLGCAQTGTGKTAAFALPI
LNRLGAEPRKTQPGRPMVLVLAPTRELAIQIGDSFATYGKHLKLRHALVYGGVGQHKQVR
DMQRGVHVLVATPGRLLDLMNQGHIQLDRLEVFVLDEADRMLDMGFLPDLKRIISKLPTR
RQSLFFSATMPPKIVELTQRLLRDPVSVNVTPKTTSVERIEQRVIHAERSDKQSMLRKIL
SGDDVDRAIVFTRTKRGANTLAEKLVKSGIPSAAIHGNKSQGARQRALDAFRRRQVQVLV
ATDVAARGIDIDGVTHVVNFDLPTEPESYVHRIGRTGRAGAEGLAISFCTAAERGELHAI
EKLIGQKLEVSGEQPKPVSAAERHEMRTNSRRPGGSRRSGGARSGAPASGQPRSAKPRSN
KRPAAAGQASGQQTGAAAVIAAAKSAAKPKAKKKRVRPASMWAEVV
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaactttccaagaactcgacctgatcgctccattacaacgcgctttggccgacgaa
aattacgaaatcccgacgccgatccaggcgcaaacgatccccgccgcgctcgatcaacgc
gacgtgttgggatgtgctcaaaccggcaccggcaagaccgctgcgtttgcattgccgatc
ctgaaccgcttgggagcggaaccgcgcaagacgcaaccgggacgtccgatggttctggtt
ctggcaccaactcgcgagttggcgatccagatcggcgacagctttgccacctacggcaag
catctgaaacttcgccacgccctggtttacggtggtgtggggcaacataaacaagttcgc
gatatgcagcgtggtgtccacgttcttgtggcgacccccggccgcttgttggacttgatg
aaccaagggcatatccaattggatcgcttggaagtctttgtgctcgacgaagccgaccgg
atgctcgacatgggattcttgcccgatctgaaacggattatcagcaagctgcccacccgt
cgccaatcgctcttcttctcggccacgatgccgccgaagatcgtcgaattgacgcagcgt
ttgttgcgcgatccggtcagcgtcaacgtgactcccaagacgacaagtgtcgaacggatc
gagcaacgcgtgatccatgccgaacggagcgacaagcagtcgatgctgcgaaagattctc
tcgggagacgatgtcgaccgcgcgatcgtcttcacacgcaccaagcgtggcgccaacacg
ttggctgaaaaattggtcaagagcggaattccatcggctgccatccacggcaacaaatct
caaggcgcacgccagcgagcgttggatgcgttccgccgtcgccaggtccaggttttggtc
gccaccgacgtcgccgctcgcggcatcgacatcgatggcgtcacgcacgtcgtcaatttc
gacctgccgaccgaaccggaaagctatgtccatcgcatcggccgaaccgggcgagcggga
gctgaagggttggcgatctcgttctgcaccgccgccgaacgtggcgagttgcacgcgatc
gaaaaattgatcggccagaagctggaggtcagtggcgaacagcccaaaccggtctcagcg
gccgaacggcacgagatgcggaccaattcgcgtcgtcccggcggctcgcgtcgctctggc
ggtgctcgctcgggagctcccgcatcggggcagcctcgatcggctaagccacgatccaat
aagcgtccggccgccgcaggccaagccagtggacagcaaaccggagcggcggcagtgatt
gccgcggcaaagtcagctgcaaaaccgaaggcgaagaaaaagcgtgtccgtcctgcaagc
atgtgggctgaagtggtatga
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