Rosistilla ulvae: EC9_23570
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Entry
EC9_23570 CDS
T09881
Symbol
rnd
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ruv
Rosistilla ulvae
Brite
KEGG Orthology (KO) [BR:
ruv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ruv03016
]
EC9_23570 (rnd)
Enzymes [BR:
ruv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
EC9_23570 (rnd)
Transfer RNA biogenesis [BR:
ruv03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
EC9_23570 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
QDS88169
UniProt:
A0A517LZY3
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All DBs
Position
3182209..3183390
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AA seq
393 aa
AA seq
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MNHETITSRDDLDRFCERLAQQPLIAFDTEFVSEDRYRPELCLLQVAAGDMLAIIDPIAI
GTTQPFWDLISTPGRTVIVHAGREEMRFCWRFAGKPIAGCFDVQMAAGFVGIEYPASLGN
LVKTICGKTLGKGETRTDWRRRPLSDGQIEYALQDVIDLATLHETIGKMVDDLQRRTWLE
EEIATLQQTVADNEVNENWHRVSGSSSLPPRQMAIIRELWRWREARAQKIDQPARRVLRD
DLLVELARRGSPDPKRINSIRGMERRNLQAHHEAIAHAIGLALDLDDSELPVKPRGERRA
KVPMLSQFLSTAIACVSRTHKMAPAIVGNADDVRELLTYEMSGNMNAPKPALLRGWRGDV
VGKAFRDVLDGKLAIRVANRQAEQPLEFIDAQP
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
ttgaatcacgaaaccataaccagccgcgacgatctcgatcgcttttgcgagcggctcgcc
cagcaaccgttaattgcttttgataccgaatttgtctcggaggatcgctaccgccccgag
ctctgtttgctgcaagtcgctgcgggcgacatgttggcgatcatcgatccgatcgcgatt
gggacgactcagccgttttgggacctgatctccacgccgggccggacggttatcgtgcac
gccggtcgcgaagagatgcggttttgttggcgtttcgctggcaaaccgatcgcgggatgt
tttgacgtccaaatggcagccggtttcgtgggaatcgaatatccggcgtcgttgggcaat
ctggtcaaaacgatctgcggaaagacgcttggcaaaggggagacacgcaccgattggcgt
cgccgcccactttccgacgggcagatcgaatacgccctgcaagacgtgatcgatctggcc
acgcttcatgaaacgatcggtaagatggtcgacgacctgcagcgtcgaacttggcttgaa
gaagagatcgcgacgcttcagcagacggtcgccgacaacgaagtaaacgagaattggcat
cgtgtctcgggcagcagcagtttgccaccgcggcagatggcgatcatccgcgaactgtgg
cgttggcgggaagccagggcgcaaaagattgatcaaccggcacggcgggtgttgcgcgac
gatctgctggtggaactagcccgccggggcagccccgatccgaaacgaatcaacagtatc
cgcgggatggaacggcggaatctgcaagcccatcacgaagcgatcgcccacgcgatcggg
ctcgcgttggatttggacgacagcgagttgccggttaaaccgcgcggtgaacgacgcgcc
aaagtcccaatgctcagccagtttctgtcgaccgcgatcgcttgtgtctcgcgaactcac
aagatggcgccagcgatcgttggcaacgccgacgatgttcgcgaattgttgacctacgaa
atgagtggcaacatgaatgccccgaaaccggcgctgttgcgtggttggcgaggcgatgtc
gtggggaaagcgttccgcgacgtgttggatggcaagctggcgatccgcgtggcgaatcga
caagccgaacagccgttggaatttatcgacgcccaaccttag
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