KEGG   Rosistilla ulvae: EC9_25730
Entry
EC9_25730         CDS       T09881                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
ruv  Rosistilla ulvae
Brite
KEGG Orthology (KO) [BR:ruv00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ruv02048]
    EC9_25730
Enzymes [BR:ruv01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     EC9_25730
Prokaryotic defense system [BR:ruv02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    EC9_25730
SSDB
Motif
Pfam: DEAD ResIII Cas3-like_C_2 AAA_22 Helicase_C HD Cas3_HD PhoH Phage_holin_3_7
Other DBs
NCBI-ProteinID: QDS88383
UniProt: A0A517M0I9
LinkDB
Position
3470230..3472617
AA seq 795 aa
MFWGHSRNGRGHGVPEALADHIRRVDDFARKFSEPLDLSAAASISALMHDLGKYSDRFNN
YVQGRSGCSSPDHWSAGARLVISALGGHNEQRLHLLDAIRLAIESHHSQLSTLSYPRESA
RRLDEYFASKSRLKCDEFAILMDRWRKDGFQLPGLGDERLASADAAAMLESRLLYSCLVD
ADFLATEGHFSGDVAIPYQPRSLAPEFDFGAAADHLESIMSSLPQSQPEMQWVRDHVGVQ
CRERALDAPGLFTLTAPTGSGKTLAMLLFAFRHAQKHGHRRIVFVMPFLTIVSQTAQVIH
SALSSLPGFDPSWVLEDHSLAGRNVDGSADSENPEEMELVREQRLEADNWDAPIILTSSV
KCLESLHANRPSVCRKLHRLAKSVLIFDEVQTLPPKLASLTLATLTHLSQRFGSTVLFAT
ATQPAFEMLESEDRPPLPNLRSPSQLSGNPWAPTEILPEHDRLFQATAGRVKVKWWLDEE
LPLGEVASQIAKSDRSSLAIVNLKRHATQLFHEIGEHRCEVYHLSTSMCAEHRDQTLEVV
RNRLAEERPVKLVSTQCIEAGVDFPKRSFEGGWRSMAPLPSIAQAAGRINRSFEYAAASV
LNVFRPSVEGAHYPPGYGAGIAALQTLLTSLREEGIHPDETELISSPELMQRYYAILYGL
TDEAAMTDKLLAAVEGLDFEGVRSEYRLIGCEQRNILVAYNKASQRHLLDWHARPNQQRG
WTRDWMRAARPYTVTVYEFEFEKLAAAGCLFPIPFGAEEHLVPEECRWWALPEDAGYYDP
NVGLEVPQEDGLLEV
NT seq 2388 nt   +upstreamnt  +downstreamnt
atgttttgggggcacagtcgcaatggtcgtggccatggtgtgccagaagcgttggcggat
catattcgccgcgtcgatgacttcgccaggaagttttccgagccgttggatctgtcagcg
gctgctagtatttcggcgttgatgcatgatcttggcaagtactccgatcggttcaacaac
tatgtgcagggccggtcgggctgttcctcgccagatcactggtcagcgggagcgaggctc
gtaatctctgcgttagggggacacaatgagcagcgtcttcatctgttggacgcgattcgc
ttggccatcgagtcgcatcacagtcagctttcgacgctctcgtacccacgcgaatctgca
cgcaggttggacgaatattttgcaagtaaatcgcggctgaaatgcgatgagttcgcaatc
ttgatggatcgttggcgcaaagatgggtttcagttgccgggcctcggagatgaaaggctt
gcgtcggctgacgcggccgcgatgctggagtcgcggttgctgtactcctgtttggttgat
gcggatttccttgcgactgaaggacacttcagcggtgacgtcgccattccatatcaacct
cgtagccttgctccagagtttgatttcggtgcagctgcggatcaccttgaatccatcatg
tcgagcctgccgcagtcgcaacccgagatgcaatgggtgcgtgatcatgtgggcgttcag
tgccgagagcgagcgttggacgcgccgggcctatttacgctgacggcgccgaccggttca
ggaaaaacactggccatgcttctgttcgcatttcggcatgcccaaaagcatgggcaccgt
cgcattgtgttcgtgatgccgtttctcactatcgtcagccaaacggctcaagtcattcat
tccgctctttcctcgctccccggttttgatccgtcttgggtgttggaggatcacagtctc
gctggccgcaatgtcgatggttcagctgattcagagaatcctgaggagatggaactcgtt
cgagagcaacgactcgaagccgacaattgggacgcacctatcatactgacttcgtcggtt
aagtgcttggagtcattgcatgcgaaccgcccttccgtctgtcgaaaattgcacaggctt
gccaagagcgttttgatttttgacgaagtgcaaacgcttccacctaagctggcgtctctc
acgctggcgaccttaacacacttgtcgcagcgttttggatccaccgtgctgtttgcgacc
gcgacgcagcccgcatttgagatgctcgaatcggaggatcgtcctccgctacctaatctg
cgttcgcccagccagctaagtggcaatccgtgggcacccacggaaattcttcctgaacat
gacaggctgttccaagctacggctgggcgagtgaaggtgaagtggtggctggatgaagag
ttgccactgggcgaagtcgcatcgcagattgctaagtcagatcggtcgagcctggcgatc
gtaaacctaaagcgccatgccacgcagctattccacgagatcggggaacatcgttgcgag
gtctatcatttgtcgacttcgatgtgtgccgagcatcgagatcaaacgcttgaagtggtg
agaaaccggttggctgaagagaggcccgtgaagttggtcagtacgcaatgcatcgaggct
ggcgttgatttcccgaagcgttcgttcgagggcgggtggcgcagcatggccccacttccg
tcgattgctcaagcggcaggaaggatcaataggtcgtttgaatacgcagcggcctccgtg
ttgaacgtgtttcggccgagtgtggagggcgcccactatccacccggatatggagctggc
attgctgcgctgcagacgcttctgactagcctcagggaggaaggcatccatcccgacgaa
accgagctcatctcttcgccggagctaatgcaacgatactatgcgatcctttatgggctg
accgatgaggcggcgatgacagacaagcttttggccgcagtggaagggctcgacttcgag
ggtgttcgcagtgaataccggcttatcggttgcgaacagcgcaacatcttagtggcgtac
aacaaagcgtcgcagcggcacctgcttgattggcacgcgcggccgaaccagcagcgaggt
tggacgcgggactggatgcgagcagcccggccgtacaccgtgaccgtctatgagtttgaa
ttcgagaaactcgctgctgcagggtgtctgtttccgatcccgtttggcgccgaggaacat
ctggtcccggaggagtgcaggtggtgggctcttccagaagacgcaggctactacgacccc
aacgtcgggctagaggtcccacaggaagatggactgctggaagtgtga

DBGET integrated database retrieval system